RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 EIF3IQ13347 325 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 HABP2Q14520 560 aaPredicted RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 TMED2Q15363 201 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 COL28A1Q2UY09 1125 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ACSBG2Q5FVE4 666 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 SPANXN3Q5MJ09 141 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 DNTTIP2Q5QJE6 756 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 RBM20Q5T481 1227 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 DUPD1Q68J44 220 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ARMC6Q6NXE6 501 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 C8orf74Q6P047 294 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ZNF549Q6P9A3 640 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 WDR74Q6RFH5 385 aaPredicted RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 OTOAQ7RTW8 1153 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ARHGAP22Q7Z5H3 698 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 VASH2Q86V25 355 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 OOSP2Q86WS3 158 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 CPNE9Q8IYJ1 553 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 SLC22A15Q8IZD6 547 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 CACNA2D3Q8IZS8 1091 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 PDIK1LQ8N165 341 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ZBTB2Q8N680 514 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ATG16L2Q8NAA4 619 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 AVL9Q8NBF6 648 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 NOA1Q8NC60 698 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 ACVR1CQ8NER5 493 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 GSDMBQ8TAX9 411 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 KCNE4Q8WWG9 221 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 LCN9Q8WX39 176 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 FAM168AQ92567 244 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 FGF11Q92914 225 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 CERS2Q96G23 380 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 AJUBAQ96IF1 538 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 C9orf72Q96LT7 481 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ZNF578Q96N58 590 aaPredicted RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 OR6C1Q96RD1 312 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 GPR21Q99679 349 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 MAP3K3Q99759 626 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 SPATA25Q9BR10 227 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 LRRC1Q9BTT6 524 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 MRI1Q9BV20 369 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 TSSK1BQ9BXA7 367 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 SLC6A15Q9H2J7 730 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 SRMSQ9H3Y6 488 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 KIR3DX1Q9H7L2 352 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 UCK1Q9HA47 277 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 CPNE5Q9HCH3 593 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 SAYSD1Q9NPB0 183 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 OBP2BQ9NPH6 170 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 THSD1Q9NS62 852 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ABCF3Q9NUQ8 709 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 SLC39A1Q9NY26 324 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 SPHK1Q9NYA1 384 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 GRHL1Q9NZI5 618 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 AKAP7Q9P0M2 348 aaPredicted RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 GRHPRQ9UBQ7 328 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 SLC23A1Q9UHI7 598 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 FBXO5Q9UKT4 447 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 MAN2B2Q9Y2E5 1009 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 KLHL20Q9Y2M5 609 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 HEBP2Q9Y5Z4 205 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 TEX264Q9Y6I9 313 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 FAM169AQ9Y6X4 670 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 COLEC10Q9Y6Z7 277 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 SPTBP11277 2137 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 HEATR5BQ9P2D3 2071 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 CACNA1BQ00975 2339 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 ZFYVE26Q68DK2 2539 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 SCO2A0A1W2PP80 73 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 SLC9B1P1A6NJY1 282 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 M0R3H8 397 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 PFDN6O15212 129 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 RRP8O43159 456 aaKnown RBP4.69□□□□□ -1.66
VPS41-205ENST00000414632 SEMA7AO75326 666 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 SLC43A1O75387 559 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 GPC4O75487 556 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 SYF2O95926 243 aaKnown RBP4.69□□□□□ -1.66
VPS41-205ENST00000414632 DHRS4L1P0CG22 281 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 FOLR1P15328 257 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 ST6GAL1P15907 406 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 MCM3P25205 808 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 PSMB5P28074 263 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 NDUFS1P28331 727 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 GABRB3P28472 473 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 PEBP1P30086 187 aaKnown RBP4.69□□□□□ -1.66
VPS41-205ENST00000414632 SSTR1P30872 391 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 CD151P48509 253 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 CDKN2DP55273 166 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 ERVPABLB-1P60509 514 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 CXADRP78310 365 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 GUCY2DQ02846 1103 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 PRKAA1Q13131 559 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 TRA2AQ13595 282 aaKnown RBP eCLIP4.69□□□□□ -1.66
VPS41-205ENST00000414632 TSTA3Q13630 321 aaPredicted RBP4.69□□□□□ -1.66
VPS41-205ENST00000414632 RAB32Q13637 225 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 GRB7Q14451 532 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 USP10Q14694 798 aaKnown RBP4.69□□□□□ -1.66
VPS41-205ENST00000414632 CLPPQ16740 277 aaPredicted RBP4.69□□□□□ -1.66
VPS41-205ENST00000414632 WHAMMP3Q1A5X7 153 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 KLHL38Q2WGJ6 581 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms