RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 MS4A6EQ96DS6 147 aa13.97□□□□□ -0.17
LIMS4-201ENST00000413601 OR1F2PQ96R84 312 aa13.97□□□□□ -0.17
LIMS4-201ENST00000413601 RIC8BQ9NVN3 520 aa13.97□□□□□ -0.17
LIMS4-201ENST00000413601 ZNF358Q9NW07 568 aa13.97□□□□□ -0.17
LIMS4-201ENST00000413601 A0A0G2JN53 185 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 EXOC1LA0A1B0GW35 172 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 CCDC189A1A4V9 331 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 LRIT2A6NDA9 550 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 TRIM49D1C9J1S8 452 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 K7EPI3 171 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 RIPK2O43353 540 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 CLEC3AO75596 197 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 KRT38O76015 456 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 SEC24DO94855 1032 aaPredicted RBP13.96□□□□□ -0.17
LIMS4-201ENST00000413601 TBX6O95947 436 aaPredicted RBP13.96□□□□□ -0.17
LIMS4-201ENST00000413601 FHP07954 510 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 CYC1P08574 325 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 GFAPP14136 432 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 CNTFP26441 200 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 BTN3A2P78410 334 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 RHAGQ02094 409 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 LAPTM5Q13571 262 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 ABRAXAS2Q15018 415 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 SETDB1Q15047 1291 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 NSDHLQ15738 373 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 TECRLQ5HYJ1 363 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 LINC00696Q6ZRV3 163 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 TRMT10CQ7L0Y3 403 aaKnown RBP13.96□□□□□ -0.17
LIMS4-201ENST00000413601 ANKRD37Q7Z713 158 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 TEX9Q8N6V9 391 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 BRIX1Q8TDN6 353 aaKnown RBP13.96□□□□□ -0.17
LIMS4-201ENST00000413601 TM9SF4Q92544 642 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 GAL3ST3Q96A11 431 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 TBC1D20Q96BZ9 403 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 FAR2Q96K12 515 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 IMMP1LQ96LU5 166 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 EFCAB11Q9BUY7 163 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 RHBGQ9H310 441 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 CLMPQ9H6B4 373 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 SLAMF7Q9NQ25 335 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 CPSF2Q9P2I0 782 aaKnown RBP13.96□□□□□ -0.17
LIMS4-201ENST00000413601 ZNF180Q9UJW8 692 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 B3GNT3Q9Y2A9 372 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 CSAG2Q9Y5P2 127 aa13.96□□□□□ -0.17
LIMS4-201ENST00000413601 LRRC14BA6NHZ5 514 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 FAM227AF5H4B4 570 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 ERI3O43414 337 aaKnown RBP13.95□□□□□ -0.18
LIMS4-201ENST00000413601 KLK8O60259 260 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 B4GALT2O60909 372 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 WFS1O76024 890 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 SERPINA7P05543 415 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 ABHD2P08910 425 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 ITGAMP11215 1152 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 RNH1P13489 461 aaKnown RBP13.95□□□□□ -0.18
LIMS4-201ENST00000413601 EPB42P16452 691 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 GSTM2P28161 218 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 GCAP28676 217 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 CASP2P42575 452 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 ALDH18A1P54886 795 aaKnown RBP13.95□□□□□ -0.18
LIMS4-201ENST00000413601 TBCCQ15814 346 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 HIST2H2ACQ16777 129 aaPredicted RBP13.95□□□□□ -0.18
LIMS4-201ENST00000413601 PRR30Q53SZ7 412 aaPredicted RBP13.95□□□□□ -0.18
LIMS4-201ENST00000413601 PAGE2BQ5JRK9 111 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 HIST2H2AA3Q6FI13 130 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 IGFL2Q6UWQ7 119 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 ISLR2Q6UXK2 745 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 GSPT2Q8IYD1 628 aaKnown RBP13.95□□□□□ -0.18
LIMS4-201ENST00000413601 SIRT6Q8N6T7 355 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 PLPP5Q8NEB5 264 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 CPT1CQ8TCG5 803 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 PSMF1Q92530 271 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 TSLPQ969D9 159 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 MIB2Q96AX9 1013 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 SEC16BQ96JE7 1060 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 TUBB6Q9BUF5 446 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 TXLNGYQ9BZA5 131 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 L2HGDHQ9H9P8 463 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 CLK4Q9HAZ1 481 aaKnown RBP13.95□□□□□ -0.18
LIMS4-201ENST00000413601 PTGFRNQ9P2B2 879 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 C19orf25Q9UFG5 118 aaPredicted RBP13.95□□□□□ -0.18
LIMS4-201ENST00000413601 ANGPTL3Q9Y5C1 460 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 TENM4Q6N022 2769 aa13.95□□□□□ -0.18
LIMS4-201ENST00000413601 MAGEB17A8MXT2 336 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 SIX3O95343 332 aaPredicted RBP13.94□□□□□ -0.18
LIMS4-201ENST00000413601 SNRPAP09012 282 aaKnown RBP13.94□□□□□ -0.18
LIMS4-201ENST00000413601 ICAM2P13598 275 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 JAK1P23458 1154 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 PLA2G16P53816 162 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 BTG2P78543 158 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 RUNX2Q13950 521 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 E2F2Q14209 437 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 NAA30Q147X3 362 aaPredicted RBP13.94□□□□□ -0.18
LIMS4-201ENST00000413601 INPP5JQ15735 1006 aaPredicted RBP13.94□□□□□ -0.18
LIMS4-201ENST00000413601 ADPRMQ3LIE5 342 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 SFT2D3Q587I9 215 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 TEX35Q5T0J7 233 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 RIPOR1Q6ZS17 1223 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 CA13Q8N1Q1 262 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 OR2L5Q8NG80 312 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 DNAJB14Q8TBM8 379 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms