RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 FAF1Q9UNN5 650 aaPredicted RBP19.25■□□□□ 0.67
USP39-204ENST00000409766 PLEKHM1Q9Y4G2 1056 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 CEPT1Q9Y6K0 416 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 FEZF1A0PJY2 475 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 COL9A1P20849 921 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 CTHP32929 405 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 SHMT2P34897 504 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 CYP4F2P78329 520 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 VLDLRP98155 873 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 COX20Q5RI15 118 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 CCNYL2Q5T2Q4 361 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 TTC23Q5W5X9 447 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 SLC30A9Q6PML9 568 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 LPCAT2Q7L5N7 544 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 RAB42Q8N4Z0 105 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 TMIGD2Q96BF3 282 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 CAMK1GQ96NX5 476 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 F2RL3Q96RI0 385 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 APOOQ9BUR5 198 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 C1QTNF7Q9BXJ2 289 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 TRIM4Q9C037 500 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 FBRSQ9HAH7 460 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 TM9SF3Q9HD45 589 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 TMEFF2Q9UIK5 374 aaPredicted RBP19.24■□□□□ 0.67
USP39-204ENST00000409766 AP1M2Q9Y6Q5 423 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 CCDC85CA6NKD9 419 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 H3BSA7 217 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 TNFRSF21O75509 655 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 EGFP01133 1207 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 FABP3P05413 133 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 HOXB2P14652 356 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 SERPINB1P30740 379 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 MAT2AP31153 395 aaKnown RBP19.24■□□□□ 0.67
USP39-204ENST00000409766 BSGP35613 385 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 HTR4Q13639 388 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 CLCA4Q14CN2 919 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.24■□□□□ 0.67
USP39-204ENST00000409766 MMP21Q8N119 569 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 C11orf65Q8NCR3 313 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 OR52N2Q8NGI0 321 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 SLC6A16Q9GZN6 736 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 FZD3Q9NPG1 666 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 IMP3Q9NV31 184 aaKnown RBP19.24■□□□□ 0.67
USP39-204ENST00000409766 TAS2R9Q9NYW1 312 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 LMCD1Q9NZU5 365 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 TAAR2Q9P1P5 351 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 RAPGEFL1Q9UHV5 662 aa19.24■□□□□ 0.67
USP39-204ENST00000409766 TBC1D3DA0A087WVF3 549 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 TBC1D3IA0A087WXS9 549 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 TBC1D3EA0A087X179 549 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 TBC1D3KA0A087X1G2 549 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 TBC1D3FA6NER0 549 aaPredicted RBP19.23■□□□□ 0.67
USP39-204ENST00000409766 CCDC160A6NGH7 325 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 TBC1D3LB9A6J9 549 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 HS6ST1O60243 411 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 KCNJ13O60928 360 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 GCM2O75603 506 aaPredicted RBP19.23■□□□□ 0.67
USP39-204ENST00000409766 FKBP9O95302 570 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 TBC1D3HP0C7X1 549 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 CDH2P19022 906 aaPredicted RBP19.23■□□□□ 0.67
USP39-204ENST00000409766 PIGAP37287 484 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 CRATP43155 626 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 RAB28P51157 221 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 KCNAB2Q13303 367 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 TEAD4Q15561 434 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 TBC1D3GQ6DHY5 549 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 TBC1D3CQ6IPX1 549 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 DCP2Q8IU60 420 aaKnown RBP19.23■□□□□ 0.67
USP39-204ENST00000409766 ADGRF3Q8IZF5 1079 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 TBC1D3Q8IZP1 549 aaPredicted RBP19.23■□□□□ 0.67
USP39-204ENST00000409766 ARL10Q8N8L6 244 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 MIEF1Q9NQG6 463 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 C3orf18Q9UK00 162 aa19.23■□□□□ 0.67
USP39-204ENST00000409766 A0A1W2PRB8 838 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 ANHXE9PGG2 379 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 hCG_2039718K7EN88 272 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 RTCAO00442 366 aaKnown RBP19.22■□□□□ 0.67
USP39-204ENST00000409766 KLF8O95600 359 aaPredicted RBP19.22■□□□□ 0.67
USP39-204ENST00000409766 ETFAP13804 333 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 CSNK1G2P78368 415 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 PRDX1Q06830 199 aaKnown RBP19.22■□□□□ 0.67
USP39-204ENST00000409766 ANGPTL8Q6UXH0 198 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 PIWIL3Q7Z3Z3 882 aaKnown RBP19.22■□□□□ 0.67
USP39-204ENST00000409766 OR2A1Q8NGT9 310 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 SCARF2Q96GP6 870 aaPredicted RBP19.22■□□□□ 0.67
USP39-204ENST00000409766 ASPSCR1Q9BZE9 553 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 GABARAPL1Q9H0R8 117 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 XKR8Q9H6D3 395 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 SLC24A3Q9HC58 644 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 PREBQ9HCU5 417 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 LTB4R2Q9NPC1 389 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 ICKQ9UPZ9 632 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 IGKV1-8A0A0C4DH67 115 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 TMEM229AB2RXF0 380 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 ELK4P28324 431 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 MAPK12P53778 367 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 IQCCQ4KMZ1 466 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 CEP68Q76N32 757 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 THAP5Q7Z6K1 395 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 C8orf59Q8N0T1 100 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms