RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 CLK4Q9HAZ1 481 aaKnown RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF670-ZNF695F2Z2N8 137 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 TULP2O00295 520 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 TGFB1I1O43294 461 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 OR12D1P0DN82 309 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 GADD45AP24522 165 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 POU3F4P49335 361 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 EEF1A2Q05639 463 aaKnown RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 IRF5Q13568 498 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 RUNX2Q13950 521 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 SOWAHAQ2M3V2 549 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 MTFR2Q6P444 385 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 PLET1Q6UQ28 207 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 GALNT12Q8IXK2 581 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 STK32AQ8WU08 396 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 CMTM7Q96FZ5 175 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 KLHL15Q96M94 604 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 IL17FQ96PD4 163 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 POLR2J2Q9GZM3 115 aaKnown RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 DNTTIP1Q9H147 329 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 ARL8BQ9NVJ2 186 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 GJD2Q9UKL4 321 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 RPH3ALQ9UNE2 315 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 RNF11Q9Y3C5 154 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 LTN1O94822 1766 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 FABP12A6NFH5 140 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 H2BFMP0C1H6 154 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 DEFB134Q4QY38 66 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 RNF111Q6ZNA4 994 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 IRGQQ8WZA9 623 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 SLC7A11Q9UPY5 501 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 FADS3Q9Y5Q0 445 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 MAFBQ9Y5Q3 323 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 IQGAP1P46940 1657 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 PAX7P23759 505 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 AP3S2P59780 193 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 TRIM73Q86UV7 250 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 OR2T34Q8NGX1 318 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 OR2T3Q8NH03 318 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 HCFC1R1Q9NWW0 138 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 EEF1E1-BLOC1S5C9J1V9 151 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 EEF1E1O43324 174 aaKnown RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 IFNGR1P15260 489 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 PFKLP17858 780 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 EPHA1P21709 976 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 DPYSQ14117 519 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 C9orf152Q5JTZ5 239 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM198Q66K66 360 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 RNF130Q86XS8 419 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 RASSF5Q8WWW0 418 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 ARRDC3Q96B67 414 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 SDSLQ96GA7 329 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 PGAM5Q96HS1 289 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 POLDIP3Q9BY77 421 aaKnown RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 SOX17Q9H6I2 414 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 TXNRD2Q9NNW7 524 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 TREM1Q9NP99 234 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 RNF225M0QZC1 329 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 COCHO43405 550 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 HRGP04196 525 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 THEGLP0DJG4 465 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 ADORA3P0DMS8 318 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 PAX3P23760 479 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 TMEFF1Q8IYR6 380 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 DENND1AQ8TEH3 1009 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 OR5B2Q96R09 309 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 KCNA7Q96RP8 456 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF649Q9BS31 505 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 FAM234AQ9H0X4 552 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 MED16Q9Y2X0 877 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 HS3ST4Q9Y661 456 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 A0A0A6YYH2 397 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 A6NJ64 397 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 NDUFS1P28331 727 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 ERV3-1Q14264 604 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 FXNQ16595 210 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 FIGNQ5HY92 759 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 ERN2Q76MJ5 926 aaKnown RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF765Q7L2R6 523 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 SH3RF1Q7Z6J0 888 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 OR2AP1Q8NGE2 309 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 HOPXQ9BPY8 73 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 RBM24Q9BX46 236 aaKnown RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 POLR2J3Q9H1A7 115 aaKnown RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 GNB4Q9HAV0 340 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 DLC1Q96QB1 1528 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF850A8MQ14 1090 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 RAD1O60671 282 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 BPGMP07738 259 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 CCDC80Q76M96 950 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 CLEC4DQ8WXI8 215 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 GCDHQ92947 438 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 FOXN4Q96NZ1 517 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 PCDHAC1Q9H158 963 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF358Q9NW07 568 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 KCTD3Q9Y597 815 aa8.13□□□□□ -1.11
SCN9A-203ENST00000409672 RGPD8O14715 1765 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-203ENST00000409672 EFCAB9A8MZ26 197 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 CTHP32929 405 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms