RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 SLC24A3Q9HC58 644 aa15.77■□□□□ 0.12
SCRN1-203ENST00000409570 FBXO6Q9NRD1 293 aaPredicted RBP15.77■□□□□ 0.12
SCRN1-203ENST00000409570 DNAJB12Q9NXW2 375 aaKnown RBP15.77■□□□□ 0.12
SCRN1-203ENST00000409570 PDE10AQ9Y233 779 aa15.77■□□□□ 0.12
SCRN1-203ENST00000409570 FREM3P0C091 2139 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 IGKV3D-11A0A0A0MRZ8 115 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 TCRBV16S1A1N1A0A5B0 115 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 CTAGE9A4FU28 777 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 A8MUA0 341 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 FAM155BO75949 473 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 TPSB2P20231 275 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 MAOAP21397 527 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 GRK3P35626 688 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 DLX5P56178 289 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 MEF2AQ02078 507 aaPredicted RBP15.76■□□□□ 0.11
SCRN1-203ENST00000409570 FOXD4Q12950 439 aaPredicted RBP15.76■□□□□ 0.11
SCRN1-203ENST00000409570 CTBP1Q13363 440 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 NAE1Q13564 534 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 TPSAB1Q15661 275 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 KCTD19Q17RG1 926 aaPredicted RBP15.76■□□□□ 0.11
SCRN1-203ENST00000409570 AGTRAPQ6RW13 159 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 LCTLQ6UWM7 567 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 C4orf22Q6V702 233 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 CLYBLQ8N0X4 340 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 APCDD1LQ8NCL9 501 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 ALKBH8Q96BT7 664 aaKnown RBP15.76■□□□□ 0.11
SCRN1-203ENST00000409570 SARGQ9BW04 601 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 SGPP1Q9BX95 441 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 CCDC68Q9H2F9 335 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 NECTIN3Q9NQS3 549 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 DEPPQ9NTK1 212 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 ZNF358Q9NW07 568 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 ADAMTS6Q9UKP5 1117 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 GUCA1BQ9UMX6 200 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 L3MBTL1Q9Y468 752 aa15.76■□□□□ 0.11
SCRN1-203ENST00000409570 TRBV11-1A0A0K0K1C0 115 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 NDUFS4O43181 175 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 CEP104O60308 925 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 AVILO75366 819 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 CTAG2O75638 210 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 NPPBP16860 134 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 PAMP19021 973 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 PPP2R2AP63151 447 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 CDK16Q00536 496 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 PWP1Q13610 501 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 CCNG2Q16589 344 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 GXYLT1Q4G148 440 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 DRICH1Q6PGQ1 229 aaPredicted RBP15.75■□□□□ 0.11
SCRN1-203ENST00000409570 KIAA0408Q6ZU52 694 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 TMEM156Q8N614 296 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 ABHD11Q8NFV4 315 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 OR4K1Q8NGD4 311 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 OR5M3Q8NGP4 307 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 DLL4Q9NR61 685 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 PNPLA3Q9NST1 481 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 ST6GALNAC2Q9UJ37 374 aa15.75■□□□□ 0.11
SCRN1-203ENST00000409570 ZNF223Q9UK11 482 aaPredicted RBP15.75■□□□□ 0.11
SCRN1-203ENST00000409570 NSD1Q96L73 2696 aaPredicted RBP15.74■□□□□ 0.11
SCRN1-203ENST00000409570 FAM237BA0A1B0GVD1 139 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 PINLYPA6NC86 204 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 NPIPA2E9PIF3 369 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 NPIPA3F8WFD2 350 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 EIF3FO00303 357 aaPredicted RBP15.74■□□□□ 0.11
SCRN1-203ENST00000409570 OR1F1O43749 312 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 ITGA10O75578 1167 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 ZNF888P0CJ79 500 aaPredicted RBP15.74■□□□□ 0.11
SCRN1-203ENST00000409570 CLCN2P51788 898 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 SKP1P63208 163 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 DHX34Q14147 1143 aaKnown RBP15.74■□□□□ 0.11
SCRN1-203ENST00000409570 CEBPEQ15744 281 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 NIPAL1Q6NVV3 410 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 PAOXQ6QHF9 649 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCRN1-203ENST00000409570 UTP15Q8TED0 518 aaKnown RBP15.74■□□□□ 0.11
SCRN1-203ENST00000409570 PRDM9Q9NQV7 894 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 FBXW2Q9UKT8 454 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 NCKAP5O14513 1909 aa15.74■□□□□ 0.11
SCRN1-203ENST00000409570 TRBC2A0A5B9 178 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 TUBB4AP04350 444 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 SERPIND1P05546 499 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 CCND1P24385 295 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 CCR8P51685 355 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 PPIAP62937 165 aaKnown RBP15.73■□□□□ 0.11
SCRN1-203ENST00000409570 HYAL2Q12891 473 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 THOC5Q13769 683 aaKnown RBP15.73■□□□□ 0.11
SCRN1-203ENST00000409570 ARMC3Q5W041 872 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 CASC4Q6P4E1 433 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 PSD4Q8NDX1 1056 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 B3GNT7Q8NFL0 401 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 TRIM58Q8NG06 486 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 OR5M9Q8NGP3 310 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 OR10Q1Q8NGQ4 319 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 NT5CQ8TCD5 201 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 ZNF669Q96BR6 464 aaPredicted RBP15.73■□□□□ 0.11
SCRN1-203ENST00000409570 PDLIM2Q96JY6 352 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 TTYH2Q9BSA4 534 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 POLDIP3Q9BY77 421 aaKnown RBP15.73■□□□□ 0.11
SCRN1-203ENST00000409570 SLC6A16Q9GZN6 736 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 SPNS1Q9H2V7 528 aa15.73■□□□□ 0.11
SCRN1-203ENST00000409570 ZDHHC11Q9H8X9 412 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms