RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 EPN3Q9H201 632 aa12.39□□□□□ -0.43
LIMS2-203ENST00000409254 DDX31Q9H8H2 851 aaKnown RBP12.39□□□□□ -0.43
LIMS2-203ENST00000409254 ZNF395Q9H8N7 513 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-203ENST00000409254 FARSBQ9NSD9 589 aaKnown RBP12.39□□□□□ -0.43
LIMS2-203ENST00000409254 CUTCQ9NTM9 273 aa12.39□□□□□ -0.43
LIMS2-203ENST00000409254 TMEM45AQ9NWC5 275 aa12.39□□□□□ -0.43
LIMS2-203ENST00000409254 MS4A12Q9NXJ0 267 aa12.39□□□□□ -0.43
LIMS2-203ENST00000409254 SLC12A4Q9UP95 1085 aa12.39□□□□□ -0.43
LIMS2-203ENST00000409254 HYKKA2RU49 373 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 PLPP1O14494 284 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 SDHDO14521 159 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 ERI3O43414 337 aaKnown RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 HCRTR1O43613 425 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 GUCY1B2O75343 617 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 SKAP2O75563 359 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 CD63P08962 238 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 PIM1P11309 404 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 HIST1H1TP22492 207 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 MRPL19P49406 292 aaKnown RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 MTTPP55157 894 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 ERVK-8P63133 956 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 CYP4F2P78329 520 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 FOXM1Q08050 763 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 TBL3Q12788 808 aaKnown RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 TARDBPQ13148 414 aaKnown RBP eCLIP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 NR6A1Q15406 480 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 PDCD2Q16342 344 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 HKDC1Q2TB90 917 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 TOR1AIP1Q5JTV8 583 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 TCHHL1Q5QJ38 904 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 METTL21CQ5VZV1 264 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 Q6ZSR9 355 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 ACAD11Q709F0 780 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 IKBIPQ70UQ0 350 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 LARP4Q71RC2 724 aaKnown RBP eCLIP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 TMEM126BQ8IUX1 230 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 AGR3Q8TD06 166 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 UTP15Q8TED0 518 aaKnown RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 CHTF18Q8WVB6 975 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 FKBP10Q96AY3 582 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 NXPE2Q96DL1 559 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 SERINC2Q96SA4 455 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 ZNF717Q9BY31 904 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 NUF2Q9BZD4 464 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 SYNPO2LQ9H987 977 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 ACTR5Q9H9F9 607 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 COPS7BQ9H9Q2 264 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 LRTM1Q9HBL6 345 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 ANKHQ9HCJ1 492 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 LYRM4Q9HD34 91 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 TXLNGQ9NUQ3 528 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 PNPOQ9NVS9 261 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 OCIAD1Q9NX40 245 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 LYARQ9NX58 379 aaKnown RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 SLC39A1Q9NY26 324 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 MCM8Q9UJA3 840 aa12.38□□□□□ -0.43
LIMS2-203ENST00000409254 TMEM184BQ9Y519 407 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-203ENST00000409254 AKAP13Q12802 2813 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 GALR3O60755 368 aaPredicted RBP12.37□□□□□ -0.43
LIMS2-203ENST00000409254 SCRG1O75711 98 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 MYO1DO94832 1006 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 FAM107AO95990 144 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 TGFB1P01137 390 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 PRPS2P11908 318 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 DDX5P17844 614 aaKnown RBP12.37□□□□□ -0.43
LIMS2-203ENST00000409254 SERPINB3P29508 390 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 TIA1P31483 386 aaKnown RBP eCLIP12.37□□□□□ -0.43
LIMS2-203ENST00000409254 RORAP35398 523 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 SSR2P43308 183 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 ASMTP46597 345 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 AVPR1BP47901 424 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 NEK2P51955 445 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 EMX2Q04743 252 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 DSG2Q14126 1118 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 KIAA0040Q15053 153 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 AP5B1Q2VPB7 878 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 OR4C11Q6IEV9 310 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 ADNP2Q6IQ32 1131 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 ZNF517Q6ZMY9 492 aaPredicted RBP12.37□□□□□ -0.43
LIMS2-203ENST00000409254 COMMD6Q7Z4G1 85 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 SPATA19Q7Z5L4 167 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 STARD8Q92502 1023 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 TUBGCP3Q96CW5 907 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 TCF7L2Q9NQB0 619 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 IRAK4Q9NWZ3 460 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 NOP53Q9NZM5 478 aaKnown RBP12.37□□□□□ -0.43
LIMS2-203ENST00000409254 MARCOQ9UEW3 520 aaPredicted RBP12.37□□□□□ -0.43
LIMS2-203ENST00000409254 PHF11Q9UIL8 331 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 TRIM33Q9UPN9 1127 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 FIS1Q9Y3D6 152 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 MAP4K5Q9Y4K4 846 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 NEUROG3Q9Y4Z2 214 aa12.37□□□□□ -0.43
LIMS2-203ENST00000409254 NUP214P35658 2090 aaPredicted RBP12.37□□□□□ -0.43
LIMS2-203ENST00000409254 GOLGA8QA0A0J9YX86 632 aa12.36□□□□□ -0.43
LIMS2-203ENST00000409254 DCDC2BA2VCK2 349 aa12.36□□□□□ -0.43
LIMS2-203ENST00000409254 GOLGA8OA6NCC3 632 aa12.36□□□□□ -0.43
LIMS2-203ENST00000409254 CDRT15L2A8MXV6 281 aa12.36□□□□□ -0.43
LIMS2-203ENST00000409254 GOLGA8NF8WBI6 632 aa12.36□□□□□ -0.43
LIMS2-203ENST00000409254 PCDH17O14917 1159 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms