RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 NACAP1Q9BZK3 213 aa4.41□□□□□ -1.7
HMGB1P13-201ENST00000406019 CCSER1Q9C0I3 900 aa4.41□□□□□ -1.7
HMGB1P13-201ENST00000406019 ECT2Q9H8V3 914 aa4.41□□□□□ -1.7
HMGB1P13-201ENST00000406019 RNF121Q9H920 327 aa4.41□□□□□ -1.7
HMGB1P13-201ENST00000406019 OR6C2Q9NZP2 312 aa4.41□□□□□ -1.7
HMGB1P13-201ENST00000406019 SLC12A6Q9UHW9 1150 aa4.41□□□□□ -1.7
HMGB1P13-201ENST00000406019 NSG2Q9Y328 171 aa4.41□□□□□ -1.7
HMGB1P13-201ENST00000406019 SAA2-SAA4A0A096LPE2 208 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 SERINC4A6NH21 518 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 F8WDY8 70 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 BMPR1BO00238 502 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 CLN5O75503 358 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 GRAP2O75791 330 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 KRT33AO76009 404 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 AKR7A3O95154 331 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 CHRNGP07510 517 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 UMODP07911 640 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 IGHV4-38-2P0DP08 117 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 DARSP14868 501 aaKnown RBP4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 LIFP15018 202 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 LHCGRP22888 699 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 RBMS1P29558 406 aaKnown RBP4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 AKT2P31751 481 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 CETN2P41208 172 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 MAGEA11P43364 429 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 NSFP46459 744 aaKnown RBP4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 NR0B1P51843 470 aaKnown RBP4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 ZNF132P52740 706 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 HYAL1Q12794 435 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 CDH18Q13634 790 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 TAF13Q15543 124 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 STX1AQ16623 288 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 HSP90AA5PQ58FG0 334 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 SLC25A53Q5H9E4 307 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 MACC1Q6ZN28 852 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 USP43Q70EL4 1123 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 IPMKQ8NFU5 416 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 DQX1Q8TE96 717 aaKnown RBP4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 ATG10Q9H0Y0 220 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 TRPV6Q9H1D0 765 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 PPANQ9NQ55 473 aaKnown RBP4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 SLC35D1Q9NTN3 355 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 PANK4Q9NVE7 773 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 PILRBQ9UKJ0 227 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 MAN1B1Q9UKM7 699 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 R4GN57 208 aa4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 CENPJQ9HC77 1338 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P13-201ENST00000406019 TRIM64CA6NLI5 447 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 SLC22A2O15244 555 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 TEX28O15482 410 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 SYT7O43581 403 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 BUB3O43684 328 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 LRP3O75074 770 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 PEX11AO75192 247 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 DFFBO76075 338 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 TSHBP01222 138 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 ATP1B1P05026 303 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 B4GALT1P15291 398 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 FCARP24071 287 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 OR1D2P34982 312 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 MDH1P40925 334 aaKnown RBP4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 SLC6A12P48065 614 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 PITPNBP48739 271 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 HERV-K104P61576 105 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 IRX4P78413 519 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 PRKCEQ02156 737 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 ARL16Q0P5N6 197 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 SPP2Q13103 211 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 GIT2Q14161 759 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 RBM39Q14498 530 aaKnown RBP4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 EXT1Q16394 746 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 ANKDD1AQ495B1 522 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 CES4AQ5XG92 561 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 RAET1GQ6H3X3 334 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 DHRS11Q6UWP2 260 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 MCM10Q7L590 875 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 C5orf24Q7Z6I8 188 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 ZNF329Q86UD4 541 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 ZC3H3Q8IXZ2 948 aaKnown RBP4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 RNF148Q8N7C7 305 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 GBP7Q8N8V2 638 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 OR56B1Q8NGI3 324 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 METTL21AQ8WXB1 218 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 SEPT8Q92599 483 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 C16orf58Q96GQ5 468 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 NSL1Q96IY1 281 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 TAAR6Q96RI8 345 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 NUSAP1Q9BXS6 441 aaKnown RBP4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 RAB17Q9H0T7 212 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 SIRPDQ9H106 197 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 EVA1AQ9H8M9 152 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 ACOXLQ9NUZ1 547 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 CNOT2Q9NZN8 540 aaKnown RBP4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 CGNQ9P2M7 1197 aaKnown RBP4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 TBK1Q9UHD2 729 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 FAM153AQ9UHL3 310 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 FBXL4Q9UKA2 621 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 ICAM5Q9UMF0 924 aa4.39□□□□□ -1.71
HMGB1P13-201ENST00000406019 TNNQ9UQP3 1299 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms