RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 VPS35Q96QK1 796 aa10.31□□□□□ -0.76
CLIP4-204ENST00000404424 PKP4Q99569 1192 aa10.31□□□□□ -0.76
CLIP4-204ENST00000404424 NIPSNAP1Q9BPW8 284 aa10.31□□□□□ -0.76
CLIP4-204ENST00000404424 SLC35A5Q9BS91 424 aa10.31□□□□□ -0.76
CLIP4-204ENST00000404424 C6orf62Q9GZU0 229 aaPredicted RBP10.31□□□□□ -0.76
CLIP4-204ENST00000404424 ABCB10Q9NRK6 738 aa10.31□□□□□ -0.76
CLIP4-204ENST00000404424 IMPAD1Q9NX62 359 aa10.31□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF226Q9NYT6 803 aa10.31□□□□□ -0.76
CLIP4-204ENST00000404424 SPG21Q9NZD8 308 aa10.31□□□□□ -0.76
CLIP4-204ENST00000404424 SLCO3A1Q9UIG8 710 aa10.31□□□□□ -0.76
CLIP4-204ENST00000404424 EXO1Q9UQ84 846 aaKnown RBP10.31□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF451Q9Y4E5 1061 aa10.31□□□□□ -0.76
CLIP4-204ENST00000404424 PEX16Q9Y5Y5 336 aa10.31□□□□□ -0.76
CLIP4-204ENST00000404424 MN1Q10571 1320 aaPredicted RBP10.31□□□□□ -0.76
CLIP4-204ENST00000404424 NPC1O15118 1278 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 TSPAN6O43657 245 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 GPR37L1O60883 481 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 OPN1SWP03999 348 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 STSP08842 583 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF8P17098 575 aaPredicted RBP10.3□□□□□ -0.76
CLIP4-204ENST00000404424 CCL23P55773 120 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 CDC42P60953 191 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 FPGSQ05932 587 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 DMC1Q14565 340 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 IRF3Q14653 427 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF630Q2M218 657 aaPredicted RBP10.3□□□□□ -0.76
CLIP4-204ENST00000404424 EXOC3L2Q2M3D2 409 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 TIMM50Q3ZCQ8 353 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF385BQ569K4 471 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 ARMCX4Q5H9R4 360 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 Q6ZVL8 140 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF367Q7RTV3 350 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 SLC30A8Q8IWU4 369 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 SCAIQ8N9R8 606 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 OR2A12Q8NGT7 310 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 UTP15Q8TED0 518 aaKnown RBP10.3□□□□□ -0.76
CLIP4-204ENST00000404424 MTERF3Q96E29 417 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 WDR34Q96EX3 536 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 HHIPL1Q96JK4 782 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 MAPKAP1Q9BPZ7 522 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 CCM2Q9BSQ5 444 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 CDADC1Q9BWV3 514 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 KLHL25Q9H0H3 589 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 AMBNQ9NP70 447 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 C1GALT1Q9NS00 363 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 CNOT2Q9NZN8 540 aaKnown RBP10.3□□□□□ -0.76
CLIP4-204ENST00000404424 HCN4Q9Y3Q4 1203 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 SCN5AQ14524 2016 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 PNMA8CA0A1B0GUJ8 204 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 ARRDC5A6NEK1 342 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 EFCAB10A6NFE3 127 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 FADS2P1A8MWK0 482 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 DSCR3O14972 297 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 TEX28O15482 410 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 MED26O95402 600 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 PTTG1O95997 202 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 LRG1P02750 347 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 CTSAP10619 480 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 DBTP11182 482 aaKnown RBP10.3□□□□□ -0.76
CLIP4-204ENST00000404424 PABPC1P11940 636 aaKnown RBP10.3□□□□□ -0.76
CLIP4-204ENST00000404424 ETV3P41162 512 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 MAGEA10P43363 369 aaPredicted RBP10.3□□□□□ -0.76
CLIP4-204ENST00000404424 BDKRB1P46663 353 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 GSSP48637 474 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 RGS6P49758 472 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 CDK6Q00534 326 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 ST3GAL4Q11206 333 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 PDE7AQ13946 482 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 COLEC12Q5KU26 742 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 COX20Q5RI15 118 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 DEFB128Q7Z7B8 93 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 GPR65Q8IYL9 337 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 OR52J3Q8NH60 311 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 CD99L2Q8TCZ2 262 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 AUTS2Q8WXX7 1259 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 NEIL2Q969S2 332 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 PIP5K1AQ99755 562 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 TCF25Q9BQ70 676 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 EFCAB11Q9BUY7 163 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 RIOK2Q9BVS4 552 aaKnown RBP10.3□□□□□ -0.76
CLIP4-204ENST00000404424 CDCA4Q9BXL8 241 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 RLIMQ9NVW2 624 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 GPR83Q9NYM4 423 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 MKLN1Q9UL63 735 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 DUSP12Q9UNI6 340 aa10.3□□□□□ -0.76
CLIP4-204ENST00000404424 TSPAN11A1L157 253 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 HTR3EA5X5Y0 456 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 SH3BGRLO75368 114 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 SNX4O95219 450 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 KRT75O95678 551 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 C6orf47O95873 294 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 FURINP09958 794 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 ETV6P41212 452 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 XCR1P46094 333 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 OR1E2P47887 323 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 LIMS1P48059 325 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 EEF1A2Q05639 463 aaKnown RBP10.29□□□□□ -0.76
CLIP4-204ENST00000404424 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.29□□□□□ -0.76
CLIP4-204ENST00000404424 CCSMST1Q4G0I0 132 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 STEAP3Q658P3 488 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms