RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 FAM199XQ6PEV8 388 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 ZNF517Q6ZMY9 492 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 Q6ZSR9 355 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 CHSY3Q70JA7 882 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 TRIM46Q7Z4K8 759 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 AMER3Q8N944 861 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 TTC29Q8NA56 475 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 GALNT6Q8NCL4 622 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 OR2L5Q8NG80 312 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 OR9A4Q8NGU2 314 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 SLC7A5P2Q9GIP4 190 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 BRF2Q9HAW0 419 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 PRDM7Q9NQW5 492 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 SLC22A11Q9NSA0 550 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 MAU2Q9Y6X3 613 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 SERTM1A2A2V5 107 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 PLPP1O14494 284 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 ERI3O43414 337 aaKnown RBP15.13■□□□□ 0.01
HMGA1-204ENST00000401473 CPNE3O75131 537 aaKnown RBP15.13■□□□□ 0.01
HMGA1-204ENST00000401473 SNUPNO95149 360 aaKnown RBP15.13■□□□□ 0.01
HMGA1-204ENST00000401473 LINC00032P0C843 101 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 ATXN8OSP0DMR3 200 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 ALOX12P18054 663 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 MDH1P40925 334 aaKnown RBP15.13■□□□□ 0.01
HMGA1-204ENST00000401473 OR1D4P47884 311 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 STXBP1P61764 594 aaKnown RBP15.13■□□□□ 0.01
HMGA1-204ENST00000401473 CUL3Q13618 768 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 C10orf62Q5T681 223 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-204ENST00000401473 YOD1Q5VVQ6 348 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-204ENST00000401473 RGS9BPQ6ZS82 235 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 OR2T11Q8NH01 316 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 TWIST2Q8WVJ9 160 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 C3orf30Q96M34 536 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 C17orf62Q9BQA9 187 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 SORBS1Q9BX66 1292 aaKnown RBP15.13■□□□□ 0.01
HMGA1-204ENST00000401473 ZNF717Q9BY31 904 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-204ENST00000401473 MRPL1Q9BYD6 325 aaKnown RBP15.13■□□□□ 0.01
HMGA1-204ENST00000401473 NDOR1Q9UHB4 597 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 SRPK3Q9UPE1 567 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 NAALAD2Q9Y3Q0 740 aa15.13■□□□□ 0.01
HMGA1-204ENST00000401473 A0A1B0GX78 115 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 DSCR3O14972 297 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 KITP10721 976 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 TBL3Q12788 808 aaKnown RBP15.12■□□□□ 0.01
HMGA1-204ENST00000401473 TBC1D25Q3MII6 688 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 ZNF793Q6ZN11 406 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 DTX1Q86Y01 620 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 DSELQ8IZU8 1212 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 LRFN5Q96NI6 719 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 PRM3Q9NNZ6 103 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 THSD1Q9NS62 852 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 TXLNGQ9NUQ3 528 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 VPS29Q9UBQ0 182 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 MARCOQ9UEW3 520 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-204ENST00000401473 ACSL6Q9UKU0 697 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 SLC12A4Q9UP95 1085 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 MAP1BP46821 2468 aaKnown RBP15.12■□□□□ 0.01
HMGA1-204ENST00000401473 URADA6NGE7 173 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 TCP11X1B4DZS4 312 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 SGK494L7N484 410 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 PIP5K1BO14986 540 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 GALR3O60755 368 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-204ENST00000401473 BTN3A2P78410 334 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 ZNF33BQ06732 778 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 ABHD18Q0P651 414 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 HERC3Q15034 1050 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 TGIF1Q15583 401 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 NDUFA9Q16795 377 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 TMEM35AQ53FP2 167 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 UNQ6494/PRO21346Q6UXR6 183 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 FAM47EQ6ZV65 393 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 ABHD13Q7L211 337 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 OR5T3Q8NGG3 340 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 GAL3ST3Q96A11 431 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 MMABQ96EY8 250 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-204ENST00000401473 C7orf26Q96N11 449 aa15.12■□□□□ 0.01
HMGA1-204ENST00000401473 CROCCQ5TZA2 2017 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 ATP6AP2A0A1C7CYW4 349 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 ZNF860A6NHJ4 632 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-204ENST00000401473 STMND1H3BQB6 276 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 TLX3O43711 291 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-204ENST00000401473 SKAP2O75563 359 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-204ENST00000401473 ATP6AP2O75787 350 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 KLHL18O94889 574 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 NSA2O95478 260 aaKnown RBP15.11■□□□□ 0.01
HMGA1-204ENST00000401473 HBQ1P09105 142 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 BSGP35613 385 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 PHEXP78562 749 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 CSTF3Q12996 717 aaKnown RBP15.11■□□□□ 0.01
HMGA1-204ENST00000401473 SLC9A5Q14940 896 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 SYT16Q17RD7 645 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 C6orf15Q6UXA7 325 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-204ENST00000401473 GBP7Q8N8V2 638 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-204ENST00000401473 PIWIL2Q8TC59 973 aaKnown RBP15.11■□□□□ 0.01
HMGA1-204ENST00000401473 RGMAQ96B86 450 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 MVB12AQ96EY5 273 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 C11orf24Q96F05 449 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-204ENST00000401473 APIPQ96GX9 242 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 PPP1R36Q96LQ0 422 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms