RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 TFB2MQ9H5Q4 396 aaKnown RBP13.3□□□□□ -0.28
VAPA-202ENST00000400000 SMURF2Q9HAU4 748 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 C14orf166Q9Y224 244 aaKnown RBP13.3□□□□□ -0.28
VAPA-202ENST00000400000 PRORSD1PA6NEY8 169 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 VSTM5A8MXK1 200 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 COCHO43405 550 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 IMPDH1P20839 514 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 FOXN2P32314 431 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 DUOXA1Q1HG43 343 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 MSL3Q8N5Y2 521 aaKnown RBP13.3□□□□□ -0.28
VAPA-202ENST00000400000 CPT1CQ8TCG5 803 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 PRTFDC1Q9NRG1 225 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 PCDHGB7Q9Y5F8 929 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 CAMTA1Q9Y6Y1 1673 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 DCCP43146 1447 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 XPNPEP2O43895 674 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 GPIP06744 558 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 JUNDP17535 347 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 C12orf40Q86WS4 652 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 TTLQ8NG68 377 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 OR6Q1Q8NGQ2 317 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 SLC25A44Q96H78 314 aaPredicted RBP13.3□□□□□ -0.28
VAPA-202ENST00000400000 FBRSQ9HAH7 460 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 DUXAA6NLW8 204 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 PTX3P26022 381 aaPredicted RBP13.3□□□□□ -0.28
VAPA-202ENST00000400000 FIP1L1Q6UN15 594 aaKnown RBP13.3□□□□□ -0.28
VAPA-202ENST00000400000 PDPRQ8NCN5 879 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 IRF7Q92985 503 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 IL20RAQ9UHF4 553 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 HTR3EA5X5Y0 456 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 EDN3P14138 238 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 GLDCP23378 1020 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 TPTEP56180 551 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 GNG2P59768 71 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 CDK6Q00534 326 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 PMS2P3Q13401 168 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 IER5LQ5T953 404 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 ARSKQ6UWY0 536 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 TMIGD1Q6UXZ0 262 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 SMARCD2Q92925 531 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 CCDC86Q9H6F5 360 aaKnown RBP13.3□□□□□ -0.28
VAPA-202ENST00000400000 SRA1Q9HD15 236 aaKnown RBP13.3□□□□□ -0.28
VAPA-202ENST00000400000 STARD5Q9NSY2 213 aa13.3□□□□□ -0.28
VAPA-202ENST00000400000 A0A1B0GVI7 797 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 COQ9O75208 318 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 HTR1AP08908 422 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 SNTA1Q13424 505 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 GRK1Q15835 563 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 MEP1AQ16819 746 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 OR5J2Q8NH18 312 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 DCAKDQ8WVC6 231 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 STON2Q8WXE9 905 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 ERMAPQ96PL5 475 aaPredicted RBP13.29□□□□□ -0.28
VAPA-202ENST00000400000 HINT2Q9BX68 163 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 DNAJB9Q9UBS3 223 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 MEMO1Q9Y316 297 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 MANBAO00462 879 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 ACOX3O15254 700 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 FBLP22087 321 aaKnown RBP13.29□□□□□ -0.28
VAPA-202ENST00000400000 GMPRP36959 345 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 IRF5Q13568 498 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 CDK10Q15131 360 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 SPIN4Q56A73 249 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 DCAF12L1Q5VU92 463 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 TRAPPC6BQ86SZ2 158 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 TOMM5Q8N4H5 51 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 TEX19Q8NA77 164 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 CD300LFQ8TDQ1 290 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 AURKBQ96GD4 344 aaPredicted RBP13.29□□□□□ -0.28
VAPA-202ENST00000400000 NUSAP1Q9BXS6 441 aaKnown RBP13.29□□□□□ -0.28
VAPA-202ENST00000400000 TMEM168Q9H0V1 697 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 FN3KQ9H479 309 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 TMEM185BQ9H7F4 350 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 ANKRA2Q9H9E1 313 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 B4GALT6Q9UBX8 382 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 PRPS1L1P21108 318 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 ITPRIPL2Q3MIP1 535 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 BANPQ8N9N5 519 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 ROPN1LQ96C74 230 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 HSH2DQ96JZ2 352 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 KCTD7Q96MP8 289 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 CD180Q99467 661 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 POLDIP3Q9BY77 421 aaKnown RBP13.29□□□□□ -0.28
VAPA-202ENST00000400000 MLXQ9UH92 298 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 DLGAP4Q9Y2H0 992 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 RPL36Q9Y3U8 105 aaKnown RBP13.29□□□□□ -0.28
VAPA-202ENST00000400000 RBM47A0AV96 593 aaKnown RBP13.29□□□□□ -0.28
VAPA-202ENST00000400000 ILVBLA1L0T0 632 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 DLDP09622 509 aaKnown RBP13.29□□□□□ -0.28
VAPA-202ENST00000400000 S100A2P29034 98 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 HERV-K104P61576 105 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 SMAD2Q15796 467 aaKnown RBP13.29□□□□□ -0.28
VAPA-202ENST00000400000 KANK2Q63ZY3 851 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 NKD2Q969F2 451 aaPredicted RBP13.29□□□□□ -0.28
VAPA-202ENST00000400000 FBXL20Q96IG2 436 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 TMEM68Q96MH6 324 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 FBRSL1Q9HCM7 1045 aaKnown RBP13.29□□□□□ -0.28
VAPA-202ENST00000400000 HEPACAM2A8MVW5 462 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 ORC5O43913 435 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 DPYSL2Q16555 572 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms