RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 SHBGP04278 402 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CD72P21854 359 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 BCAP31P51572 246 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 XKP51811 444 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 SLAMF1Q13291 335 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 GRIN2CQ14957 1233 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 GALNT12Q8IXK2 581 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 FAM110BQ8TC76 370 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 FKBP10Q96AY3 582 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 ADAD1Q96M93 576 aaKnown RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 THSD1Q9NS62 852 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 FETUBQ9UGM5 382 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 MYH4Q9Y623 1939 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 EFCAB9A8MZ26 197 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 PSMD9O00233 223 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CHRM1P11229 460 aaPredicted RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 CCT3P49368 545 aaKnown RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 DIO3P55073 304 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 ZNF763Q0D2J5 394 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 ST3GAL3Q11203 375 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 MLC1Q15049 377 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 ZNF648Q5T619 568 aaPredicted RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 RSPO2Q6UXX9 243 aaPredicted RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 SLC51AQ86UW1 340 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 ANKRD46Q86W74 232 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 SLC34A3Q8N130 599 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CMASQ8NFW8 434 aaPredicted RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 NPAS2Q99743 824 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 PAAF1Q9BRP4 392 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 LINC00597Q9H2U6 94 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 FAM120CQ9NX05 1096 aaKnown RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 SLC7A11Q9UPY5 501 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 RFXAPO00287 272 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 RAB36O95755 333 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 HSD3B1P14060 373 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 DRD2P14416 443 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 HSD3B2P26439 372 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 GABRA3P34903 492 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 RAB15P59190 212 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 SLC25A11Q02978 314 aaKnown RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 FAM174BQ3ZCQ3 159 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 PAMR1Q6UXH9 720 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 YTHDF3Q7Z739 585 aaKnown RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 ZC3HC1Q86WB0 502 aaKnown RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 TMEM178AQ8NBL3 297 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 GATAD2BQ8WXI9 593 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 THRSPQ92748 146 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 AMDHD1Q96NU7 426 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 SLC24A3Q9HC58 644 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 TCF7L1Q9HCS4 588 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 SACM1LQ9NTJ5 587 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 FZD4Q9ULV1 537 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 CAMK2AQ9UQM7 478 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 LCHNA4D1U4 455 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 SOX1O00570 391 aaPredicted RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 FAM155BO75949 473 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 EGFP01133 1207 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 C8orf89P0DMQ9 161 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 PRKAR1AP10644 381 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 PORP16435 677 aaPredicted RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 HOXB9P17482 250 aaPredicted RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 SLC6A6P31641 620 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 AP3S2P59780 193 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 RACK1P63244 317 aaKnown RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 NEDD8Q15843 81 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 ABCA11PQ4W5N1 156 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 TANGO2Q6ICL3 276 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 CXorf57Q6NSI4 855 aaKnown RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 DENND6BQ8NEG7 585 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 OR10H4Q8NGA5 316 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 UTP23Q9BRU9 249 aaKnown RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 MECRQ9BV79 373 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 HDHD5Q9BXW7 423 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 CENPMQ9NSP4 180 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 LOC100506127A0A0U1RQW1 187 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 HIDE1A8MVS5 230 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 TLR4O00206 839 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 CXCR6O00574 342 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 BCHEP06276 602 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 CDH12P55289 794 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 BNIP1Q12981 228 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 EML3Q32P44 896 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 PYDC2Q56P42 97 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 PPM1JQ5JR12 505 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 ZNF598Q86UK7 904 aaKnown RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 IMP4Q96G21 291 aaKnown RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 PEX11GQ96HA9 241 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 TIMM29Q9BSF4 260 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 DPH7Q9BTV6 452 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 R3HDM2Q9Y2K5 976 aaKnown RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 SLX4Q8IY92 1834 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 SHISA7A6NL88 538 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 FOXE1O00358 373 aaPredicted RBP7.66□□□□□ -1.18
USP47-203ENST00000399455 PTGESO14684 152 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 ZBTB22O15209 634 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 EMC8O43402 210 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 TPST2O60704 377 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 APOC1P02654 83 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 MYOGP15173 224 aa7.66□□□□□ -1.18
USP47-203ENST00000399455 FNTBP49356 437 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms