RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 CAPS2Q9BXY5 557 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 SLC6A16Q9GZN6 736 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 RNF32Q9H0A6 362 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.63□□□□□ -0.39
VCX3A-202ENST00000398729 CNOT10Q9H9A5 744 aaKnown RBP12.63□□□□□ -0.39
VCX3A-202ENST00000398729 CLK4Q9HAZ1 481 aaKnown RBP12.63□□□□□ -0.39
VCX3A-202ENST00000398729 LANCL2Q9NS86 450 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 PLA2G3Q9NZ20 509 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 STMN3Q9NZ72 180 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 WWOXQ9NZC7 414 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 SLC5A6Q9Y289 635 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 DCHS2Q6V1P9 2916 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 CPAMD8Q8IZJ3 1885 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 SCN2AQ99250 2005 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 CCDC168Q8NDH2 2452 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 MAGEB17A8MXT2 336 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 B3GALT4O96024 378 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 C1QAP02745 245 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 MYBL2P10244 700 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 CD1DP15813 335 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 GSTM2P28161 218 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 HNF4AP41235 474 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 TNFSF10P50591 281 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 RAB8AP61006 207 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 STXBP1P61764 594 aaKnown RBP12.62□□□□□ -0.39
VCX3A-202ENST00000398729 ZNF33BQ06732 778 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 ZKSCAN8Q15776 578 aaPredicted RBP12.62□□□□□ -0.39
VCX3A-202ENST00000398729 C18orf21Q32NC0 220 aaPredicted RBP12.62□□□□□ -0.39
VCX3A-202ENST00000398729 SFT2D3Q587I9 215 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 SULT1C3Q6IMI6 304 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 PAPD4Q6PIY7 484 aaKnown RBP12.62□□□□□ -0.39
VCX3A-202ENST00000398729 ZDHHC24Q6UX98 284 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 TMIGD1Q6UXZ0 262 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 SLCO4C1Q6ZQN7 724 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 KRT78Q8N1N4 520 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 PPM1NQ8N819 430 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 SUN3Q8TAQ9 357 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 M1APQ8TC57 530 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 FAR1Q8WVX9 515 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 MAGEB10Q96LZ2 347 aaPredicted RBP12.62□□□□□ -0.39
VCX3A-202ENST00000398729 C5orf34Q96MH7 638 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 KCNK13Q9HB14 408 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 IGSF5Q9NSI5 407 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 GPRC5BQ9NZH0 403 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 SVILO95425 2214 aa12.62□□□□□ -0.39
VCX3A-202ENST00000398729 NF1P21359 2839 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 CTAGE15A4D2H0 777 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 OR5H15A6NDH6 313 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 A8MUI8 341 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 PSMD12O00232 456 aaPredicted RBP12.61□□□□□ -0.39
VCX3A-202ENST00000398729 CLGNO14967 610 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 B4GALT2O60909 372 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 DNAJB6O75190 326 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 WDPCPO95876 746 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 F10P00742 488 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 S100BP04271 92 aaPredicted RBP12.61□□□□□ -0.39
VCX3A-202ENST00000398729 SMIM10L1P0DMW3 83 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 EDN3P14138 238 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 ELAVL4P26378 380 aaKnown RBP12.61□□□□□ -0.39
VCX3A-202ENST00000398729 GGT5P36269 586 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 OR4D2P58180 307 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 SLC7A5Q01650 507 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 HYAL2Q12891 473 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 NAB1Q13506 487 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 SLBPQ14493 270 aaKnown RBP eCLIP12.61□□□□□ -0.39
VCX3A-202ENST00000398729 SLMAPQ14BN4 828 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 OR4D1Q15615 310 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 TRADDQ15628 312 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 INAQ16352 499 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 TOR1AIP1Q5JTV8 583 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 C8orf74Q6P047 294 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 RAPH1Q70E73 1250 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 CTAGE6Q86UF2 777 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.61□□□□□ -0.39
VCX3A-202ENST00000398729 AMER2Q8N7J2 671 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 BCORP1Q8N888 145 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 FBF1Q8TES7 1133 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 CREB3L4Q8TEY5 395 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 CCT6BQ92526 530 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 TSLPQ969D9 159 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 KIAA1191Q96A73 305 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 SMIM10Q96HG1 83 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 SEC16BQ96JE7 1060 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 UBXN10Q96LJ8 280 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 ZNF354BQ96LW1 612 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 TMEM79Q9BSE2 394 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 PITHD1Q9GZP4 211 aaPredicted RBP12.61□□□□□ -0.39
VCX3A-202ENST00000398729 MMP25Q9NPA2 562 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 OLAHQ9NV23 265 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 DNAJC11Q9NVH1 559 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 CD274Q9NZQ7 290 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 RNF112Q9ULX5 631 aa12.61□□□□□ -0.39
VCX3A-202ENST00000398729 ANKDD1BA6NHY2 528 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 TAPBPO15533 448 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 PRMT3O60678 531 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 STK16O75716 305 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 FAM155BO75949 473 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 RNH1P13489 461 aaKnown RBP12.6□□□□□ -0.39
VCX3A-202ENST00000398729 HPDP32754 393 aaPredicted RBP12.6□□□□□ -0.39
VCX3A-202ENST00000398729 HSPA7P48741 367 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms