RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 FEZF1A0PJY2 475 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 SAGE2PA6NJ88 616 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 AKR1B15C9JRZ8 316 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-203ENST00000397378 E7EVH7 732 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 GFYI3L273 518 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 SYT5O00445 386 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 CES2O00748 559 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 CLDN4O14493 209 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 KCNAB3O43448 404 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 DNAJB6O75190 326 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 SIX3O95343 332 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-203ENST00000397378 CNOT4O95628 575 aaKnown RBP8.77□□□□□ -1.01
NEDD9-203ENST00000397378 PTMAP06454 111 aaKnown RBP8.77□□□□□ -1.01
NEDD9-203ENST00000397378 FHP07954 510 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 EPXP11678 715 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 NID1P14543 1247 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 CHRM3P20309 590 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 JAK1P23458 1154 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 FMO4P31512 558 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 ADH7P40394 386 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 SKIV2L2P42285 1042 aaKnown RBP8.77□□□□□ -1.01
NEDD9-203ENST00000397378 KCNJ11Q14654 390 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 RPS6KA1Q15418 735 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 C10orf62Q5T681 223 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-203ENST00000397378 THEMIS2Q5TEJ8 643 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 MRNIPQ6NTE8 343 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 KIAA0408Q6ZU52 694 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 SLC13A5Q86YT5 568 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-203ENST00000397378 REXO1L1PQ8IX06 675 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 CCDC170Q8IYT3 715 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 CYP4Z2PQ8N1L4 340 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 AFAP1L2Q8N4X5 818 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 KCT2Q8NC54 265 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 ASB11Q8WXH4 323 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 TBC1D20Q96BZ9 403 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 MACROD1Q9BQ69 325 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 B4GALT7Q9UBV7 327 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 NAALAD2Q9Y3Q0 740 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 FAM215AQ9Y5M1 114 aa8.77□□□□□ -1.01
NEDD9-203ENST00000397378 OR14I1A6ND48 311 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 BTNL10A8MVZ5 291 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 PFDN6O15212 129 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 SLC35G6P0C7Q6 338 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 ARNTP27540 789 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 NMBRP28336 390 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 IMPA1P29218 277 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 ASCL1P50553 236 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 NR0B1P51843 470 aaKnown RBP8.76□□□□□ -1.01
NEDD9-203ENST00000397378 SKP1P63208 163 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 HERC3Q15034 1050 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 SPA17Q15506 151 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 OASLQ15646 514 aaKnown RBP8.76□□□□□ -1.01
NEDD9-203ENST00000397378 KRTAP24-1Q3LI83 254 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 CAPN13Q6MZZ7 669 aaPredicted RBP8.76□□□□□ -1.01
NEDD9-203ENST00000397378 QSOX2Q6ZRP7 698 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 RGS9BPQ6ZS82 235 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 SDCCAG8Q86SQ7 713 aaPredicted RBP8.76□□□□□ -1.01
NEDD9-203ENST00000397378 ASPGQ86U10 573 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 SLC26A11Q86WA9 606 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 LRRC57Q8N9N7 239 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 NFAM1Q8NET5 270 aaPredicted RBP8.76□□□□□ -1.01
NEDD9-203ENST00000397378 OR5T3Q8NGG3 340 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 ZCCHC10Q8TBK6 192 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 CREB3L4Q8TEY5 395 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 SLC13A3Q8WWT9 602 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 RNASE6Q93091 150 aaKnown RBP8.76□□□□□ -1.01
NEDD9-203ENST00000397378 PIGTQ969N2 578 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 FAM136AQ96C01 138 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 CCDC138Q96M89 665 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 SH3GL2Q99962 352 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 RBCK1Q9BYM8 510 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 DEFB126Q9BYW3 111 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 IL22Q9GZX6 179 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 PCBD2Q9H0N5 130 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 ZDHHC11Q9H8X9 412 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 RAB6BQ9NRW1 208 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 ABCF3Q9NUQ8 709 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 KLHL42Q9P2K6 505 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 GALPQ9UBC7 116 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 NCKAP5O14513 1909 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 NINQ8N4C6 2090 aa8.76□□□□□ -1.01
NEDD9-203ENST00000397378 IGKV3D-11A0A0A0MRZ8 115 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 TCRBV7S2A1N4TA0A589 114 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 TCRBV16S1A1N1A0A5B0 115 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 ZNF860A6NHJ4 632 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 FAM47E-STBD1D6RA91 191 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 E5RI56 91 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 BCKDKO14874 412 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 CHST10O43529 356 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 SPRY1O43609 319 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-203ENST00000397378 ZBTB14O43829 449 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 LCMT2O60294 686 aaKnown RBP8.75□□□□□ -1.01
NEDD9-203ENST00000397378 GALR3O60755 368 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-203ENST00000397378 GOSR1O95249 250 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 VAPBO95292 243 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 SYF2O95926 243 aaKnown RBP8.75□□□□□ -1.01
NEDD9-203ENST00000397378 TUBB4AP04350 444 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 APRTP07741 180 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 MPC1LP0DKB6 136 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 COILP38432 576 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms