RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ASB1Q9Y576 335 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 CAPN6Q9Y6Q1 641 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 SDR42E2A6NKP2 422 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 FOXO6A8MYZ6 492 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 NME2P1O60361 137 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 SLC25A12O75746 678 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 KRT38O76015 456 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 STATHP02808 62 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 FHP07954 510 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 SLC35G6P0C7Q6 338 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 CD1EP15812 388 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 NPPBP16860 134 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 ZNF24P17028 368 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 NME2P22392 152 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 CCND1P24385 295 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 TRHRP34981 398 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-208ENST00000397204 MAGEA6P43360 314 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 HLCSP50747 726 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 SLC26A5P58743 744 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 SKP1P63208 163 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 PWP1Q13610 501 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 DHX34Q14147 1143 aaKnown RBP8.21□□□□□ -1.1
CAPN3-208ENST00000397204 OCLNQ16625 522 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 TMEM211Q6ICI0 200 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 LRRC8EQ6NSJ5 796 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 CASC4Q6P4E1 433 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 CHSY3Q70JA7 882 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 C17orf64Q86WR6 236 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 PDSS2Q86YH6 399 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 TMEM139Q8IV31 216 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 SHISA5Q8N114 240 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 ARMC10Q8N2F6 343 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 AFAP1L2Q8N4X5 818 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 GIMAP7Q8NHV1 300 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 ASB5Q8WWX0 329 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 TMEM125Q96AQ2 219 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 TBC1D20Q96BZ9 403 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 PEX11GQ96HA9 241 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 SARGQ9BW04 601 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 SAMD15Q9P1V8 674 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 PPT2Q9UMR5 302 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 MED16Q9Y2X0 877 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 NAALAD2Q9Y3Q0 740 aa8.21□□□□□ -1.1
CAPN3-208ENST00000397204 ABCA4P78363 2273 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 ACANP16112 2415 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 ABCA2Q9BZC7 2435 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 TCRBV7S3A2A0A539 114 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 FEZF1A0PJY2 475 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 KLRC4-KLRK1H3BQV0 150 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 SLC16A5O15375 505 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 CHST10O43529 356 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 GALR3O60755 368 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-208ENST00000397204 AVILO75366 819 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 RDH16O75452 317 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 C8GP07360 202 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 MLNP12872 115 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 JAK1P23458 1154 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 PTGS2P35354 604 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 COILP38432 576 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-208ENST00000397204 KCNJ1P48048 391 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 MLF1P58340 268 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 CTBP1Q13363 440 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 NAE1Q13564 534 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 CUL1Q13616 776 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 ZNF470Q6ECI4 717 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 UGT3A1Q6NUS8 523 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 ZNF549Q6P9A3 640 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 AGTRAPQ6RW13 159 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 STRA8Q7Z7C7 330 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 CAND1Q86VP6 1230 aaKnown RBP8.2□□□□□ -1.1
CAPN3-208ENST00000397204 ZNF227Q86WZ6 799 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 PALM2Q8IXS6 379 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 TBC1D19Q8N5T2 526 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 MFSD9Q8NBP5 474 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 ABHD11Q8NFV4 315 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 OR4K1Q8NGD4 311 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 LILRB4Q8NHJ6 448 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 CD200R1Q8TD46 325 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 CALML6Q8TD86 181 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 PTCHD1Q96NR3 888 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 GPR21Q99679 349 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 DESI2Q9BSY9 194 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 HAUS8Q9BT25 410 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 SGPP1Q9BX95 441 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 PARVBQ9HBI1 364 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 XAB2Q9HCS7 855 aaKnown RBP8.2□□□□□ -1.1
CAPN3-208ENST00000397204 DMGDHQ9UI17 866 aaKnown RBP8.2□□□□□ -1.1
CAPN3-208ENST00000397204 PDE10AQ9Y233 779 aa8.2□□□□□ -1.1
CAPN3-208ENST00000397204 KLF13Q9Y2Y9 288 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-208ENST00000397204 CPAMD8Q8IZJ3 1885 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 AKAP6Q13023 2319 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 ZCWPW2A0A1B0GU75 182 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 USP27XA6NNY8 438 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 B4GALT2O60909 372 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 HAUS5O94927 633 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 FGGP02679 453 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 HIST1H2AGP0C0S8 130 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-208ENST00000397204 ALOX12P18054 663 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 IGFBP2P18065 325 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 HIST1H2ADP20671 130 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms