RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TRIM42Q8IWZ5 723 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 CENPLQ8N0S6 344 aaPredicted RBP13.79□□□□□ -0.2
SEC13-208ENST00000397109 TTLQ8NG68 377 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 NT5CQ8TCD5 201 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 TM9SF4Q92544 642 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 MACROD1Q9BQ69 325 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 PITHD1Q9GZP4 211 aaPredicted RBP13.79□□□□□ -0.2
SEC13-208ENST00000397109 IQCGQ9H095 443 aaKnown RBP13.79□□□□□ -0.2
SEC13-208ENST00000397109 CD274Q9NZQ7 290 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 COPEO14579 308 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 SPAG7O75391 227 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 STK16O75716 305 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 BMP10O95393 424 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 SERPIND1P05546 499 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 DHRS4L1P0CG22 281 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 TFEBP19484 476 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 IL10P22301 178 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 ITGA3P26006 1051 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 GSTM2P28161 218 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 CRHR1P34998 444 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 GDF5P43026 501 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 MAT1AQ00266 395 aaKnown RBP13.78□□□□□ -0.2
SEC13-208ENST00000397109 RBBP5Q15291 538 aaKnown RBP13.78□□□□□ -0.2
SEC13-208ENST00000397109 OR4D1Q15615 310 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 SLCO4C1Q6ZQN7 724 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 ABHD13Q7L211 337 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 ISCA2Q86U28 154 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 LRRC34Q8IZ02 419 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 KRT78Q8N1N4 520 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 AFAP1L2Q8N4X5 818 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 PDPRQ8NCN5 879 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 ZNF740Q8NDX6 193 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 OR51Q1Q8NH59 317 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 ZCCHC10Q8TBK6 192 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 RAB3IL1Q8TBN0 382 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 TCP10LQ8TDR4 215 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 SEC16BQ96JE7 1060 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 TRIM4Q9C037 500 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 ZNF552Q9H707 407 aaPredicted RBP13.78□□□□□ -0.2
SEC13-208ENST00000397109 CLK4Q9HAZ1 481 aaKnown RBP13.78□□□□□ -0.2
SEC13-208ENST00000397109 DNAJC11Q9NVH1 559 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 DCDC2Q9UHG0 476 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 PTBP2Q9UKA9 531 aaKnown RBP13.78□□□□□ -0.2
SEC13-208ENST00000397109 MKL2Q9ULH7 1088 aa13.78□□□□□ -0.2
SEC13-208ENST00000397109 RP1L1Q8IWN7 2480 aaPredicted RBP13.78□□□□□ -0.2
SEC13-208ENST00000397109 A0A1W2PQ72 361 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 TCP11X1B4DZS4 312 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 SGK494L7N484 410 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 FFAR3O14843 346 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 CLGNO14967 610 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 GPR42O15529 346 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 TAPBPO15533 448 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 KLHL18O94889 574 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 KLHL2O95198 593 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 SERPINA6P08185 405 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 PYGBP11216 843 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 ALOX12P18054 663 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 KCNC4Q03721 635 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 RAPSNQ13702 412 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 SYT16Q17RD7 645 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 FAM83EQ2M2I3 478 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 C18orf21Q32NC0 220 aaPredicted RBP13.77□□□□□ -0.21
SEC13-208ENST00000397109 IGFL3Q6UXB1 125 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 NDUFAF7Q7L592 441 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 PRSS41Q7RTY9 318 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 CCDC197Q8NCU1 140 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 MGARPQ8TDB4 240 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 LRRC8CQ8TDW0 803 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 METTL21AQ8WXB1 218 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 TMEM79Q9BSE2 394 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 LHPPQ9H008 270 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 SPNS1Q9H2V7 528 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 EHD1Q9H4M9 534 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 ALG9Q9H6U8 611 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 NT5DC2Q9H857 520 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 IGSF5Q9NSI5 407 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 NUDT4Q9NZJ9 180 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 GRID1Q9ULK0 1009 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 PLLPQ9Y342 182 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 NAALAD2Q9Y3Q0 740 aa13.77□□□□□ -0.21
SEC13-208ENST00000397109 LOC102723996A0A087X1L8 192 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 NSG1A0A0A6YYJ2 146 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 SYCE1LA8MT33 242 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 KLF11O14901 512 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 SNX3O60493 162 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 KERAO60938 352 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 ALOX12BO75342 701 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 GSTA1P08263 222 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 TAC1P20366 129 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 ETV4P43268 484 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 XCR1P46094 333 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 HSPA7P48741 367 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 AP2B1P63010 937 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 SNRPNP63162 240 aaKnown RBP13.76□□□□□ -0.21
SEC13-208ENST00000397109 DLG1Q12959 904 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 AGAP7PQ5VUJ5 663 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 KLC3Q6P597 504 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 TMEM205Q6UW68 189 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 C6orf89Q6UWU4 347 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 TMIGD1Q6UXZ0 262 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms