RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 RPA3P35244 121 aaPredicted RBP12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 SSR4P51571 173 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 WNT3P56703 355 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 ABATP80404 500 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 XKR6Q5GH73 641 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 QSOX2Q6ZRP7 698 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 KCT2Q8NC54 265 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 MAGEC3Q8TD91 643 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 TBC1D20Q96BZ9 403 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 TSSK1BQ9BXA7 367 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 SPTLC3Q9NUV7 552 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 ALKBH4Q9NXW9 302 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 UTP6Q9NYH9 597 aaKnown RBP12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 DRG1Q9Y295 367 aaKnown RBP12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 YARS2Q9Y2Z4 477 aaKnown RBP12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 NAALAD2Q9Y3Q0 740 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 SLC22A7Q9Y694 548 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 TRBV11-1A0A0K0K1C0 115 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 E7ENX8 843 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 GOT2P00505 430 aaKnown RBP12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 CNR1P21554 472 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 PTH2RP49190 550 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 CLCN2P51788 898 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 BTG2P78543 158 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 TAP2Q03519 686 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 ACVR1Q04771 509 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 PRPSAP1Q14558 356 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 SLC10A1Q14973 349 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 ACKR1Q16570 336 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 ACSF3Q4G176 576 aaPredicted RBP12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 GK5Q6ZS86 529 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 B3GNT7Q8NFL0 401 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 ISL2Q96A47 359 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 FAM173AQ9BQD7 235 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 WDR83Q9BRX9 315 aaKnown RBP12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 AARSD1Q9BTE6 412 aaKnown RBP12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 P2RY12Q9H244 342 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 ANKHQ9HCJ1 492 aa12.64□□□□□ -0.39
VCPKMT-201ENST00000395859 TRGV5A0A0B4J1U4 118 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 ATP6AP2A0A1C7CYW4 349 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 ZNF860A6NHJ4 632 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 DEFB108AA8MXU0 73 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 G3V3Y1 287 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 H7BY64 318 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 CES2O00748 559 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 ATP6AP2O75787 350 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 OR6B1O95007 311 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 CCNDBP1O95273 360 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 RPS15AP62244 130 aaKnown RBP12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 TMED2Q15363 201 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 TERF2Q15554 542 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 ANKRD20A4Q4UJ75 823 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 KIAA0930Q6ICG6 404 aaPredicted RBP12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 BBS12Q6ZW61 710 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 SLC35G2Q8TBE7 412 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 ZCCHC10Q8TBK6 192 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 ZNF480Q8WV37 535 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 CTNNBL1Q8WYA6 563 aaPredicted RBP12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 CAPZA3Q96KX2 299 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 PTCHD1Q96NR3 888 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 PRAP1Q96NZ9 151 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 CCL19Q99731 98 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 KCNF1Q9H3M0 494 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 SEMA4BQ9NPR2 832 aaPredicted RBP12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 ZNHIT6Q9NWK9 470 aaKnown RBP12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 TUBA8Q9NY65 449 aaPredicted RBP12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 CLDN16Q9Y5I7 305 aa12.63□□□□□ -0.39
VCPKMT-201ENST00000395859 A0A087X1B8 175 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 SH3D21A4FU49 640 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 A8MVJ9 347 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 APOC4-APOC2K7ER74 178 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 PRMT5O14744 637 aaPredicted RBP12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 ZSCAN12O43309 604 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 KCNAB3O43448 404 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 TLX2O43763 284 aaPredicted RBP12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 GALR3O60755 368 aaPredicted RBP12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 MFAP3LO75121 409 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 PSIP1O75475 530 aaKnown RBP12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 IL18BPO95998 194 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 APOC2P02655 101 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 TMEM253P0C7T8 217 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 FPR1P21462 350 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 PNLIPRP1P54315 467 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 CCZ1BP86790 482 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 CCZ1P86791 482 aaPredicted RBP12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 RUNX1T1Q06455 604 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 TNK1Q13470 666 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 AFTPHQ6ULP2 937 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 LACC1Q8IV20 430 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 CYP4X1Q8N118 509 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 TC2NQ8N9U0 490 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 PPFIBP2Q8ND30 876 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 OR8K1Q8NGG5 319 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 OR4L1Q8NH43 312 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 THAP11Q96EK4 314 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 PPP1R2P1Q96PQ5 205 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 PKP4Q99569 1192 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 EBNA1BP2Q99848 306 aaKnown RBP12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 BAG1Q99933 345 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms