RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZNF473Q8WTR7 871 aaKnown RBP15.68■□□□□ 0.1
CXCL1-201ENST00000395761 TTC9Q92623 222 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 ATP6V1E2Q96A05 226 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 MIEF2Q96C03 454 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 MS4A6EQ96DS6 147 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 TMEM237Q96Q45 408 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 ERVK-6Q9BXR3 956 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 FAM53CQ9NYF3 392 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 ZFYVE26Q68DK2 2539 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 LOC400499M0QZD8 3231 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 CCDC88CQ9P219 2028 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 A0A0G2JN53 185 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 TMEM120BA0PK00 339 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 SH3BGRLO75368 114 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 SUPT7LO94864 414 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 MYL2P10916 166 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 GSTM2P28161 218 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 CCNG1P51959 295 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 OLR1P78380 273 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 RHDQ02161 417 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 KLC1Q07866 573 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 TRAF3Q13114 568 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 SSPNQ14714 243 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 RBBP7Q16576 425 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 CPSF6Q16630 551 aaKnown RBP eCLIP15.67■□□□□ 0.1
CXCL1-201ENST00000395761 LINC00303Q3SY05 128 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 PCSK4Q6UW60 755 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 ZYG11AQ6WRX3 759 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 ABHD13Q7L211 337 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 SLC22A9Q8IVM8 553 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 ZC3H7AQ8IWR0 971 aaKnown RBP15.67■□□□□ 0.1
CXCL1-201ENST00000395761 OR51Q1Q8NH59 317 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 TRPC4APQ8TEL6 797 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 UBE2E3Q969T4 207 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 SEC16BQ96JE7 1060 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 F2RL3Q96RI0 385 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 NTMT1Q9BV86 223 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 MKKSQ9NPJ1 570 aaPredicted RBP15.67■□□□□ 0.1
CXCL1-201ENST00000395761 SLC17A7Q9P2U7 560 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 MID2Q9UJV3 735 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 POLHQ9Y253 713 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 SCN3AQ9NY46 2000 aa15.67■□□□□ 0.1
CXCL1-201ENST00000395761 PCSK5Q92824 1860 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 H0YIV9 168 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 ERI3O43414 337 aaKnown RBP15.66■□□□□ 0.1
CXCL1-201ENST00000395761 UGDHO60701 494 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 JRKO75564 520 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 CLDN9O95484 217 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 ITGB2P05107 769 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 DHRS4L1P0CG22 281 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 CPA3P15088 417 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 ARL1P40616 181 aaPredicted RBP15.66■□□□□ 0.1
CXCL1-201ENST00000395761 NEK2P51955 445 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 STXBP1P61764 594 aaKnown RBP15.66■□□□□ 0.1
CXCL1-201ENST00000395761 PPP2R2AP63151 447 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 CLCQ05315 142 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 DDX39BQ13838 428 aaKnown RBP15.66■□□□□ 0.1
CXCL1-201ENST00000395761 ZRSR2Q15696 482 aaKnown RBP15.66■□□□□ 0.1
CXCL1-201ENST00000395761 ADPRMQ3LIE5 342 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 BORAQ6PGQ7 559 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 PPP1R32Q7Z5V6 425 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 MILR1Q7Z6M3 343 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 OR4F6Q8NGB9 312 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 HUS1BQ8NHY5 278 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 PPP4R1Q8TF05 950 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 L3HYPDHQ96EM0 354 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 CATSPER2Q96P56 530 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 FAM111AQ96PZ2 611 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 MTERF1Q99551 399 aaKnown RBP15.66■□□□□ 0.1
CXCL1-201ENST00000395761 MESP1Q9BRJ9 268 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 MS4A8Q9BY19 250 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 TGIF2Q9GZN2 237 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 REXO4Q9GZR2 422 aaKnown RBP15.66■□□□□ 0.1
CXCL1-201ENST00000395761 ZNF225Q9UK10 706 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 NXT1Q9UKK6 140 aaKnown RBP15.66■□□□□ 0.1
CXCL1-201ENST00000395761 CHD6Q8TD26 2715 aa15.66■□□□□ 0.1
CXCL1-201ENST00000395761 OR2W5A6NFC9 320 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 URADA6NGE7 173 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 CHST10O43529 356 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 BMP10O95393 424 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 TGFB1P01137 390 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 HPDP32754 393 aaPredicted RBP15.65■□□□□ 0.1
CXCL1-201ENST00000395761 XCR1P46094 333 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 EFNA3P52797 238 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 PLA2G16P53816 162 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 BTN3A2P78410 334 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 ATP1A4Q13733 1029 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 UBE3DQ7Z6J8 389 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 MRGPREQ86SM8 312 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 CCNYL1Q8N7R7 359 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 CCDC63Q8NA47 563 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 ARMC2Q8NEN0 867 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 GAL3ST3Q96A11 431 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 MTFMTQ96DP5 389 aaKnown RBP15.65■□□□□ 0.1
CXCL1-201ENST00000395761 CCDC126Q96EE4 140 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 QRFPRQ96P65 431 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 OR51B5Q9H339 312 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 PRM3Q9NNZ6 103 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 NKIRAS1Q9NYS0 192 aa15.65■□□□□ 0.1
CXCL1-201ENST00000395761 C3orf18Q9UK00 162 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms