RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 SLC6A4P31645 630 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 GGT5P36269 586 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 DCDC1P59894 354 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 TPRG1LQ5T0D9 272 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 RPS27LQ71UM5 84 aaKnown RBP10.04□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF565Q8N9K5 539 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 MFSD2AQ8NA29 543 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 GATSQ8NAP1 163 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 TMEM203Q969S6 136 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 SCGB3A2Q96PL1 93 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 GPR62Q9BZJ7 368 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 TRIM36Q9NQ86 728 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 ASB6Q9NWX5 421 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 EIF3KQ9UBQ5 218 aaKnown RBP10.04□□□□□ -0.8
COL4A6-203ENST00000394872 AASSQ9UDR5 926 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 PRODH2Q9UF12 536 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 NPIPA2E9PIF3 369 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 NPIPA3F8WFD2 350 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF763Q0D2J5 394 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 CBLBQ13191 982 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 TMEM225Q6GV28 225 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 SLC39A5Q6ZMH5 540 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF227Q86WZ6 799 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 FAM86B1Q8N7N1 296 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 OR4C15Q8NGM1 316 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 THAP3Q8WTV1 239 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-203ENST00000394872 HSH2DQ96JZ2 352 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 ALPK1Q96QP1 1244 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 TPT1P8Q9HAU6 139 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF224Q9NZL3 707 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 SHPRHQ149N8 1683 aa10.04□□□□□ -0.8
COL4A6-203ENST00000394872 A0A1W2PQU0 124 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ACOX3O15254 700 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 IFI30P13284 250 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 GRIA2P42262 883 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 AP2S1P53680 142 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 MAZP56270 477 aaKnown RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 PLP2Q04941 152 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 KBTBD6Q86V97 674 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 TSGA13Q96PP4 275 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 RBP7Q96R05 134 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 PEBP4Q96S96 227 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 NLGN3Q9NZ94 848 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 PLCL2Q9UPR0 1127 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ZFR2Q9UPR6 939 aaKnown RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 HTR3EA5X5Y0 456 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 H6PDO95479 791 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 HTR1AP08908 422 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF630Q2M218 657 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 CEP76Q8TAP6 659 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 GNPDA2Q8TDQ7 276 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 STON2Q8WXE9 905 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 SMARCD2Q92925 531 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 GLYATL1Q969I3 302 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 MOAP1Q96BY2 351 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 BORCS8Q96FH0 119 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 LRCH3Q96II8 777 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 OAZ3Q9UMX2 235 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 C2orf78A6NCI8 922 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 OR2AT4A6NND4 320 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 VILLO15195 856 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 SLC10A3P09131 477 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF16P17020 682 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ITIH1P19827 911 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 IRF5Q13568 498 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 CCDC116Q8IYX3 515 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 FANK1Q8TC84 345 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 TSACCQ96A04 125 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ARHGAP39Q9C0H5 1083 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 TRPV4Q9HBA0 871 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ZDHHC18Q9NUE0 388 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 MS4A12Q9NXJ0 267 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 PADI2Q9Y2J8 665 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 MYOCOSA0A1B0GUC4 107 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 FAM227AF5H4B4 570 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ACRV1P26436 265 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 GABRA3P34903 492 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 MECP2P51608 486 aaKnown RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 PIGWQ7Z7B1 504 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 TSSK6Q9BXA6 273 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 EBF2Q9HAK2 575 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 MAGEE1Q9HCI5 957 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 RBMX2Q9Y388 322 aaKnown RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 TEX264Q9Y6I9 313 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 MON2Q7Z3U7 1717 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 TEX13CA0A0J9YWL9 993 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 SH3D21A4FU49 640 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 IGLON5A6NGN9 336 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 SOX14O95416 240 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 SLC2A2P11168 524 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 UQCRC2P22695 453 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 DNAJB1P25685 340 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 AGTR2P50052 363 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 RPL19P84098 196 aaKnown RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 MAD2L1BPQ15013 274 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 PON2Q15165 354 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 SCAMP4Q969E2 229 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 C16orf70Q9BSU1 422 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms