RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 SIRT5Q9NXA8 310 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 THUMPD1Q9NXG2 353 aaKnown RBP18.16■□□□□ 0.5
HOXC6-202ENST00000394331 SCG5P05408 212 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 ARSBP15848 533 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 ZP3P21754 424 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 PTX3P26022 381 aaPredicted RBP18.16■□□□□ 0.5
HOXC6-202ENST00000394331 UBE3AQ05086 875 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 ANKRD54Q6NXT1 300 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 GALNT10Q86SR1 603 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 TRIM69Q86WT6 500 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 QRFPRQ96P65 431 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 SEPT5Q99719 369 aaPredicted RBP18.16■□□□□ 0.5
HOXC6-202ENST00000394331 MYOCQ99972 504 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 ARHGAP39Q9C0H5 1083 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 TMEM168Q9H0V1 697 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 SEC14L4Q9UDX3 406 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 GLS2Q9UI32 602 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 RPS6KA6Q9UK32 745 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 ING4Q9UNL4 249 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 POLR3HQ9Y535 204 aaPredicted RBP18.16■□□□□ 0.5
HOXC6-202ENST00000394331 LCHNA4D1U4 455 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 TLR5O60602 858 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 IFNA7P01567 189 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 S100A12P80511 92 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 AFTPHQ6ULP2 937 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 HSDL2Q6YN16 418 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 CAMKK1Q8N5S9 505 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 CLDN22Q8N7P3 220 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 LINC01599Q8WXQ3 324 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 MYEOVQ96EZ4 313 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 SORCS2Q96PQ0 1159 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 PPIL3Q9H2H8 161 aaKnown RBP18.16■□□□□ 0.5
HOXC6-202ENST00000394331 MIXL1Q9H2W2 232 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 PCDHGB3Q9Y5G1 929 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 RNF215Q9Y6U7 377 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 CIB4A0PJX0 185 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 FAM170BA6NMN3 283 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 A8MUA0 341 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 CCND3P30281 292 aaPredicted RBP18.15■□□□□ 0.5
HOXC6-202ENST00000394331 SREBF2Q12772 1141 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 PTCHD3Q3KNS1 767 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 C16orf62Q7Z3J2 963 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 RASGRP3Q8IV61 690 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 PPP3R2Q96LZ3 170 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 CNPPD1Q9BV87 410 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 MAN2B2Q9Y2E5 1009 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 MTMR11A4FU01 709 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 NDUFS3O75489 264 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 VIPP01282 170 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 SLC10A3P09131 477 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 ZDHHC11BP0C7U3 371 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 ZNF140P52738 457 aaPredicted RBP18.15■□□□□ 0.5
HOXC6-202ENST00000394331 MAD2L1Q13257 205 aaPredicted RBP18.15■□□□□ 0.5
HOXC6-202ENST00000394331 GPR17Q13304 367 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 PAQR3Q6TCH7 311 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 UFD1Q92890 307 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 PTP4A1Q93096 173 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 SLC25A46Q96AG3 418 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 SH3BP4Q9P0V3 963 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 VPS9D1Q9Y2B5 631 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 PCDHGB7Q9Y5F8 929 aa18.15■□□□□ 0.5
HOXC6-202ENST00000394331 PRKAR1AP10644 381 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 HOXB3P14651 431 aaPredicted RBP18.14■□□□□ 0.49
HOXC6-202ENST00000394331 HOXD9P28356 352 aaPredicted RBP18.14■□□□□ 0.49
HOXC6-202ENST00000394331 WEE1P30291 646 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 FAM174BQ3ZCQ3 159 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 ZBTB44Q8NCP5 570 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 CREB3L4Q8TEY5 395 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 KLHL15Q96M94 604 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 OPALINQ96PE5 141 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 CINPQ9BW66 212 aaPredicted RBP18.14■□□□□ 0.49
HOXC6-202ENST00000394331 CCSER2Q9H7U1 834 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 ASIC5Q9NY37 505 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 STON1Q9Y6Q2 735 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 GBF1Q92538 1859 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 PCNTO95613 3336 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 A0A0D9SEW6 157 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 SH3D21A4FU49 640 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 KHNYNO15037 678 aaKnown RBP18.14■□□□□ 0.49
HOXC6-202ENST00000394331 COL6A1P12109 1028 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 PTBP1P26599 531 aaKnown RBP eCLIP18.14■□□□□ 0.49
HOXC6-202ENST00000394331 CLCNKAP51800 687 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 PLIN5Q00G26 463 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 TAF1AQ15573 450 aaPredicted RBP18.14■□□□□ 0.49
HOXC6-202ENST00000394331 AP5B1Q2VPB7 878 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 ERICH5Q6P6B1 374 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 CFAP52Q8N1V2 620 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 NKAPQ8N5F7 415 aaKnown RBP18.14■□□□□ 0.49
HOXC6-202ENST00000394331 OR52H1Q8NGJ2 320 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 VANGL1Q8TAA9 524 aaPredicted RBP18.14■□□□□ 0.49
HOXC6-202ENST00000394331 RBPMSQ93062 196 aaKnown RBP18.14■□□□□ 0.49
HOXC6-202ENST00000394331 FUBP1Q96AE4 644 aaKnown RBP18.14■□□□□ 0.49
HOXC6-202ENST00000394331 OR5M11Q96RB7 305 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 CLMPQ9H6B4 373 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 ABCB9Q9NP78 766 aa18.14■□□□□ 0.49
HOXC6-202ENST00000394331 NOSIPQ9Y314 301 aaKnown RBP18.14■□□□□ 0.49
HOXC6-202ENST00000394331 C2orf81A6NN90 581 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 SMLR1H3BR10 107 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 ARVCFO00192 962 aa18.13■□□□□ 0.49
HOXC6-202ENST00000394331 IL1AP01583 271 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms