RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 HPSEQ9Y251 543 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 ZNF891A8MT65 544 aaPredicted RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 ZNF157P51786 506 aaPredicted RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 ZNF41P51814 821 aaPredicted RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 HERVK_113P63132 956 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 NTRK3Q16288 839 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 TMEM31Q5JXX7 168 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 ERN2Q76MJ5 926 aaKnown RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 ZNF641Q96N77 438 aaPredicted RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 ERVK-6Q9BXR3 956 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 MROQ9BYG7 248 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 TMPRSS4Q9NRS4 437 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 MYO7BQ6PIF6 2116 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 CCL15-CCL14A0A0B4J2E2 113 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 BPIP17213 487 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 ENTPD1P49961 510 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 TGFBIQ15582 683 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 CCL15Q16663 113 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 OR4Q3Q8NH05 313 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 IL26Q9NPH9 171 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 SPTBN2O15020 2390 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 TMEM150CB9EJG8 249 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 ZC3H14Q6PJT7 736 aaKnown RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 METTL7BQ6UX53 244 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 OSMRQ99650 979 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 NIFKQ9BYG3 293 aaKnown RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 WDR55Q9H6Y2 383 aaPredicted RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 ASB6Q9NWX5 421 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 PRAMEF2O60811 474 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 SEC14L2O76054 403 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 MYCLP1P12525 358 aaPredicted RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 PTCH2Q9Y6C5 1203 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 IL1AP01583 271 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 PRKCIP41743 596 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 DCLRE1AQ6PJP8 1040 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 NPNTQ6UXI9 565 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 CMC1Q7Z7K0 106 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 ANKRD23Q86SG2 305 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 OR13C3Q8NGS6 347 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 RGMAQ96B86 450 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 MRPL17Q9NRX2 175 aaKnown RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 KIAA1522Q9P206 1035 aaPredicted RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 CD300AQ9UGN4 299 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 AK6Q9Y3D8 172 aaKnown RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 CBY3A6NI87 242 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 LRRC72A6NJI9 287 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 MTPNP58546 118 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 OR1E3Q8WZA6 343 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 SLC25A36Q96CQ1 311 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 MRM3Q9HC36 420 aaKnown RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 SRA1Q9HD15 236 aaKnown RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 TIGARQ9NQ88 270 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 OVOS2A0A0J9YW53 1432 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 OVOS2Q6IE36 1432 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 FANCMQ8IYD8 2048 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 A0A1W2PQ45 241 aaPredicted RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 A0A1W2PQY0 241 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 C2P06681 752 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 IDSP22304 550 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 THBS2P35442 1172 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 TAS2R30P59541 319 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 ERVK-16P61578 105 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 MAP4K2Q12851 820 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 BEX2Q9BXY8 128 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 BEX1Q9HBH7 125 aa13.01□□□□□ -0.33
USP49-203ENST00000394253 TEX10Q9NXF1 929 aaPredicted RBP13.01□□□□□ -0.33
USP49-203ENST00000394253 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
USP49-203ENST00000394253 SPDEFO95238 335 aa13□□□□□ -0.33
USP49-203ENST00000394253 CYP2B6P20813 491 aa13□□□□□ -0.33
USP49-203ENST00000394253 GRIK4Q16099 956 aa13□□□□□ -0.33
USP49-203ENST00000394253 ADGRD1Q6QNK2 874 aa13□□□□□ -0.33
USP49-203ENST00000394253 TSPAN10Q9H1Z9 355 aaPredicted RBP13□□□□□ -0.33
USP49-203ENST00000394253 HIPK2Q9H2X6 1198 aa13□□□□□ -0.33
USP49-203ENST00000394253 ADAMTS10Q9H324 1103 aa13□□□□□ -0.33
USP49-203ENST00000394253 KCNIP1Q9NZI2 227 aa13□□□□□ -0.33
USP49-203ENST00000394253 A0A1B0GV50 99 aa13□□□□□ -0.33
USP49-203ENST00000394253 IL33O95760 270 aa13□□□□□ -0.33
USP49-203ENST00000394253 SNTB2Q13425 540 aaKnown RBP13□□□□□ -0.33
USP49-203ENST00000394253 ALPK1Q96QP1 1244 aa13□□□□□ -0.33
USP49-203ENST00000394253 CPNE5Q9HCH3 593 aa13□□□□□ -0.33
USP49-203ENST00000394253 EPHA6Q9UF33 1036 aa13□□□□□ -0.33
USP49-203ENST00000394253 ACKR2O00590 384 aa13□□□□□ -0.33
USP49-203ENST00000394253 GJB6O95452 261 aa13□□□□□ -0.33
USP49-203ENST00000394253 PER3P56645 1201 aa13□□□□□ -0.33
USP49-203ENST00000394253 PLP2Q04941 152 aa13□□□□□ -0.33
USP49-203ENST00000394253 SLC25A52Q3SY17 297 aa13□□□□□ -0.33
USP49-203ENST00000394253 CCNJQ5T5M9 372 aa13□□□□□ -0.33
USP49-203ENST00000394253 EPS8L1Q8TE68 723 aa13□□□□□ -0.33
USP49-203ENST00000394253 SLC22A18Q96BI1 424 aa13□□□□□ -0.33
USP49-203ENST00000394253 H0YAE9 185 aa13□□□□□ -0.33
USP49-203ENST00000394253 M0R2N6 131 aa13□□□□□ -0.33
USP49-203ENST00000394253 IRF2P14316 349 aa13□□□□□ -0.33
USP49-203ENST00000394253 NSG1P42857 185 aa13□□□□□ -0.33
USP49-203ENST00000394253 PPATQ06203 517 aa13□□□□□ -0.33
USP49-203ENST00000394253 HIST2H3PS2Q5TEC6 136 aa13□□□□□ -0.33
USP49-203ENST00000394253 TNFAIP8L2Q6P589 184 aaPredicted RBP13□□□□□ -0.33
USP49-203ENST00000394253 TRIM46Q7Z4K8 759 aa13□□□□□ -0.33
USP49-203ENST00000394253 HS3ST5Q8IZT8 346 aa13□□□□□ -0.33
USP49-203ENST00000394253 SLC43A2Q8N370 569 aa13□□□□□ -0.33
USP49-203ENST00000394253 PCDHAC1Q9H158 963 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms