RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ZNF888P0CJ79 500 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 ZNF24P17028 368 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 TPP2P29144 1249 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 HLCSP50747 726 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 REEP5Q00765 189 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 FRG1Q14331 258 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 MAPKAPK3Q16644 382 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 BBS9Q3SYG4 887 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 CATSPEREQ5SY80 951 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 TEDDM1Q5T9Z0 273 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 HECTD2Q5U5R9 776 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 FAM45BPQ6NSW5 357 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 SBSNQ6UWP8 590 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 ZNF227Q86WZ6 799 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 ZNF295-AS1Q8N0V1 137 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 NFAM1Q8NET5 270 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 FAM45AQ8TCE6 357 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 TMEM125Q96AQ2 219 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 C14orf79Q96F83 325 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 SPOCK3Q9BQ16 436 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 AIF1LQ9BQI0 150 aa16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 PPIEQ9UNP9 301 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 SYNDIG1LA6NDD5 238 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 FCHO1O14526 889 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 PRRG2O14669 202 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 DNAJB6O75190 326 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 RNH1P13489 461 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 ABOP16442 354 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 CDKL1Q00532 357 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 PPP1R7Q15435 360 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 PPP1R3AQ16821 1122 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 ZNF468Q5VIY5 522 aaPredicted RBP16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 DOLPP1Q86YN1 238 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 KIF2BQ8N4N8 673 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 ANKRD53Q8N9V6 530 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 ARMC2Q8NEN0 867 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 LRRC39Q96DD0 335 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 SEC16BQ96JE7 1060 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 DMRTA2Q96SC8 542 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 OSBPL9Q96SU4 736 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 KLF13Q9Y2Y9 288 aaPredicted RBP16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 MMACHCQ9Y4U1 282 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 ASB1Q9Y576 335 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 KCNE2Q9Y6J6 123 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 GTF3C1Q12789 2109 aa16.37■□□□□ 0.21
SNRPA1-202ENST00000394082 PSMD12O00232 456 aaPredicted RBP16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 B4GALT2O60909 372 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 CAPN3P20807 821 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 GSTM2P28161 218 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 HNMTP50135 292 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 HYAL2Q12891 473 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 MSS51Q4VC12 460 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 NXPE4Q6UWF7 544 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 APCDD1LQ8NCL9 501 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 C16orf52Q8NHV5 167 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 AGAP11Q8TF27 550 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 TREX2Q9BQ50 279 aaPredicted RBP16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 ENKD1Q9H0I2 346 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 TSPAN10Q9H1Z9 355 aaPredicted RBP16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 SPNS1Q9H2V7 528 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 PLAC1Q9HBJ0 212 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 DYRK1BQ9Y463 629 aa16.36■□□□□ 0.21
SNRPA1-202ENST00000394082 KLRC4-KLRK1H3BQV0 150 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 ADAM10O14672 748 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 GUCA1CO95843 209 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 SERPIND1P05546 499 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 ZNF37AP17032 561 aaPredicted RBP16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 IVDP26440 423 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 OLR1P78380 273 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 BTG2P78543 158 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 ILF2Q12905 390 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 RNFT1Q5M7Z0 435 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 THOC6Q86W42 341 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 IGDCC3Q8IVU1 814 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 KLHDC8AQ8IYD2 350 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 PDIK1LQ8N165 341 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 CPSF7Q8N684 471 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 B3GNT7Q8NFL0 401 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 TTLQ8NG68 377 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 CREB3L4Q8TEY5 395 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 NPLQ9BXD5 320 aaPredicted RBP16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 DEFB126Q9BYW3 111 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 PPANQ9NQ55 473 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 ZFATQ9P243 1243 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 ASIC3Q9UHC3 531 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 CACNA1CQ13936 2221 aa16.35■□□□□ 0.21
SNRPA1-202ENST00000394082 TFEBP19484 476 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 MAOAP21397 527 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 KIR3DL1P43629 444 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 CLCN2P51788 898 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 ITGA8P53708 1063 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 STXBP1P61764 594 aaKnown RBP16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 MORF4L2Q15014 288 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 CDSNQ15517 529 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 STEAP4Q687X5 459 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 CYP4X1Q8N118 509 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 NKAPQ8N5F7 415 aaKnown RBP16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 ZFP62Q8NB50 900 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 TSNARE1Q96NA8 513 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 PITHD1Q9GZP4 211 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms