RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ENTPD2Q9Y5L3 495 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 NUP214P35658 2090 aaPredicted RBP8.24□□□□□ -1.09
TDP1-203ENST00000393454 A0A1B0GVT2 93 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 GSTA4O15217 222 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 PPM1DO15297 605 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 ERI3O43414 337 aaKnown RBP8.24□□□□□ -1.09
TDP1-203ENST00000393454 GMNNO75496 209 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 ABCB1P08183 1280 aaPredicted RBP8.24□□□□□ -1.09
TDP1-203ENST00000393454 FURINP09958 794 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 PVRP15151 417 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 GSTM2P28161 218 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 PTDSS1P48651 473 aaKnown RBP8.24□□□□□ -1.09
TDP1-203ENST00000393454 WNT3P56703 355 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 OR4D2P58180 307 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 SLC5A12Q1EHB4 618 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 ZNF385BQ569K4 471 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 LRIF1Q5T3J3 769 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 LYSMD4Q5XG99 296 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 IKBIPQ70UQ0 350 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 UBE3DQ7Z6J8 389 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 SPPL2CQ8IUH8 684 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 MMP21Q8N119 569 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 AVL9Q8NBF6 648 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 OR4A15Q8NGL6 344 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.24□□□□□ -1.09
TDP1-203ENST00000393454 COQ8BQ96D53 544 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 SLC38A3Q99624 504 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 TBCDQ9BTW9 1192 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 ZNF717Q9BY31 904 aaPredicted RBP8.24□□□□□ -1.09
TDP1-203ENST00000393454 BHLHE41Q9C0J9 482 aaPredicted RBP8.24□□□□□ -1.09
TDP1-203ENST00000393454 LHX9Q9NQ69 397 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 PCDHGB4Q9UN71 923 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 EXO1Q9UQ84 846 aaKnown RBP8.24□□□□□ -1.09
TDP1-203ENST00000393454 SNX13Q9Y5W8 968 aa8.24□□□□□ -1.09
TDP1-203ENST00000393454 TP53BP1Q12888 1972 aaPredicted RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 CCDC163A0A0D9SF12 145 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 A0A0J9YY10 115 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 OR5K3A6NET4 321 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 EVPLLA8MZ36 301 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 LMO7DNF2Z398 122 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 ARPC2O15144 300 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 SCN2BO60939 215 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 UBXN7O94888 489 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 GNSP15586 552 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 ATP6V1B2P21281 511 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 HOXA6P31267 233 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 RAB8AP61006 207 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 STXBP1P61764 594 aaKnown RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 PPP1CAP62136 330 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 RGS1Q08116 209 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 TGM3Q08188 693 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 MUM1Q2TAK8 710 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 AASDHQ4L235 1098 aaPredicted RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 FCRL6Q6DN72 434 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 ZFP1Q6P2D0 407 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 FBXO42Q6P3S6 717 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 TRIM40Q6P9F5 258 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 LRRC74BQ6ZQY2 392 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 ZNF438Q7Z4V0 828 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 CAMKMTQ7Z624 323 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 ASPGQ86U10 573 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 WDR5BQ86VZ2 330 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 TICAM1Q8IUC6 712 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 AMER3Q8N944 861 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 RSC1A1Q92681 617 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 ZUFSPQ96AP4 578 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 CIDECQ96AQ7 238 aaPredicted RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 TM4SF18Q96CE8 201 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 MS4A6EQ96DS6 147 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 FAM120BQ96EK7 910 aaKnown RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 CCDC115Q96NT0 180 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 SARGQ9BW04 601 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 AICDAQ9GZX7 198 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 IKZF5Q9H5V7 419 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 UCKL1Q9NWZ5 548 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 ACTR3BQ9P1U1 418 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 BTNL2Q9UIR0 455 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 ADAM29Q9UKF5 820 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 AP3M1Q9Y2T2 418 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 NEUROG3Q9Y4Z2 214 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 TRBV5-3A0A0A0MS03 114 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 OR2A25A4D2G3 310 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 H3BNX3 289 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 TNFSF14O43557 240 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 TMPRSS11DO60235 418 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 NOBOXO60393 691 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 PRAMEF10O60809 474 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 CTSVO60911 334 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 PIAS2O75928 621 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 EPN2O95208 641 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 EIF2S1P05198 315 aaKnown RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 ENGP17813 658 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 HTR1EP28566 365 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 LSSP48449 732 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 RHDQ02161 417 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 KLC1Q07866 573 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 HYAL2Q12891 473 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 SLAMF1Q13291 335 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 SLC9A5Q14940 896 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 HEPACAMQ14CZ8 416 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms