RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 SH3GL3Q99963 347 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 CCDC106Q9BWC9 280 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 C1orf21Q9H246 121 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 AMBNQ9NP70 447 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 PRTFDC1Q9NRG1 225 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 WDR45Q9Y484 360 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 CABIN1Q9Y6J0 2220 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 SOBPA7XYQ1 873 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 EGFP01133 1207 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 PROS1P07225 676 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 MATN1P21941 496 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 TNFRSF4P43489 277 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 SIM1P81133 766 aaPredicted RBP12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 PDZD3Q86UT5 571 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 TMEM156Q8N614 296 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 OR56A1Q8NGH5 318 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 APIPQ96GX9 242 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 POLR2J3Q9H1A7 115 aaKnown RBP12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 UBE2ZQ9H832 354 aaPredicted RBP12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 C11orf16Q9NQ32 467 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 MS4A12Q9NXJ0 267 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 I6L893 689 aaPredicted RBP12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 XKRYO14609 159 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 HOXC11O43248 304 aaPredicted RBP12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 MAGEA3P43357 314 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 SLC36A4Q6YBV0 504 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 COMMD6Q7Z4G1 85 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 NRROSQ86YC3 692 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 DEFB123Q8N688 67 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 GRHL3Q8TE85 626 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 BIRC7Q96CA5 298 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 ATOH8Q96SQ7 321 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 KCNK12Q9HB15 430 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 PREBQ9HCU5 417 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 C5AR2Q9P296 337 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 FTSJ1Q9UET6 329 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 GSTK1Q9Y2Q3 226 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM92AA1XBS5 289 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 TCF3P15923 654 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 CD38P28907 300 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 MMP12P39900 470 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 ATP4BP51164 291 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 WSCD2Q2TBF2 565 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 EIPR1Q53HC9 387 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 GPR107Q5VW38 600 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM220AQ7Z4H9 259 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 APLFQ8IW19 511 aaPredicted RBP12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 MR1Q95460 341 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 TAPBPLQ9BX59 468 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 CFHR5Q9BXR6 569 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 NUAK2Q9H093 628 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 EPB41L1Q9H4G0 881 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 OBP2AQ9NY56 170 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 PRSS38A1L453 326 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 ITGB8P26012 769 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 AHSA2Q719I0 299 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 OR2L2Q8NH16 312 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 ADAMTS19Q8TE59 1207 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 MPP4Q96JB8 637 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 MACROD1Q9BQ69 325 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 LYARQ9NX58 379 aaKnown RBP12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 TRIP12Q14669 1992 aaPredicted RBP12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 EFCAB10A6NFE3 127 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 PRMT3O60678 531 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 COQ9O75208 318 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 MFN2O95140 757 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 PIM1P11309 404 aaPredicted RBP12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 LHCGRP22888 699 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 RPS15AP62244 130 aaKnown RBP12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 RHDQ02161 417 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 CYP27C1Q4G0S4 372 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 HMGN2P46Q86SG4 172 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 ZCCHC7Q8N3Z6 543 aaKnown RBP12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 PLA2G15Q8NCC3 412 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 DDHD1Q8NEL9 900 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 LKAAEAR1Q8TD35 194 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 ZNF480Q8WV37 535 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 ZNF354BQ96LW1 612 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 ZNF347Q96SE7 839 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 ANKMY1Q9P2S6 941 aa12.59□□□□□ -0.39
PTPRN2-202ENST00000389416 HCN1O60741 890 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 PRLHRP49683 370 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 TRAF3Q13114 568 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 MLF2Q15773 248 aaPredicted RBP12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 ZNF630Q2M218 657 aaPredicted RBP12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 KANK2Q63ZY3 851 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 CD300LGQ6UXG3 332 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 LGI4Q8N135 537 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 OR10G2Q8NGC3 310 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 OR52E1Q8NGJ3 308 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 ZNF671Q8TAW3 534 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 SLC30A3Q99726 388 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 PAIP1Q9H074 479 aaKnown RBP12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 C8orf4Q9NR00 106 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 TVP23BQ9NYZ1 205 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 ACSL6Q9UKU0 697 aa12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 KHNYNO15037 678 aaKnown RBP12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 HTRA2O43464 458 aaPredicted RBP12.58□□□□□ -0.4
PTPRN2-202ENST00000389416 PCDHGA12O60330 932 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms