RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 GCNT6Q5T4J0 391 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 RAET1GQ6H3X3 334 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 ZNF547Q8IVP9 402 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 OR4K1Q8NGD4 311 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 PPCDCQ96CD2 204 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 YIPF6Q96EC8 236 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 SLC35A5Q9BS91 424 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 CCDC177Q9NQR7 707 aaPredicted RBP14.34□□□□□ -0.11
SCFD2-201ENST00000388940 NECTIN3Q9NQS3 549 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 C1GALT1Q9NS00 363 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 PAIP2BQ9ULR5 123 aaKnown RBP14.34□□□□□ -0.11
SCFD2-201ENST00000388940 KIF26AQ9ULI4 1882 aaPredicted RBP14.34□□□□□ -0.11
SCFD2-201ENST00000388940 PRRT4C9JH25 899 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 RGS10O43665 173 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 POP7O75817 140 aaKnown RBP14.34□□□□□ -0.11
SCFD2-201ENST00000388940 C6orf47O95873 294 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 TGFB1P01137 390 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 RRM2P31350 389 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 TCEAL5Q5H9L2 206 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 COX20Q5RI15 118 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 IKBIPQ70UQ0 350 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 PRSS48Q7RTY5 328 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 CCDC71Q8IV32 467 aaPredicted RBP14.34□□□□□ -0.11
SCFD2-201ENST00000388940 OXR1Q8N573 874 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 SLC35B4Q969S0 331 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 NXPE3Q969Y0 559 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 ZNF707Q96C28 371 aaPredicted RBP14.34□□□□□ -0.11
SCFD2-201ENST00000388940 SIGLEC11Q96RL6 698 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 ZDHHC5Q9C0B5 715 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 RUBCNLQ9H714 662 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 PRM3Q9NNZ6 103 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 NDUFAF4Q9P032 175 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 PCDH10Q9P2E7 1040 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 ITGB1BP2Q9UKP3 347 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 B3GNT3Q9Y2A9 372 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 MRPS23Q9Y3D9 190 aaKnown RBP14.34□□□□□ -0.11
SCFD2-201ENST00000388940 LYVE1Q9Y5Y7 322 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 A8MVJ9 347 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 SLC22A1O15245 554 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 ETFAP13804 333 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 ADRB3P13945 408 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 EPHA2P29317 976 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 EEF1A2Q05639 463 aaKnown RBP14.33□□□□□ -0.12
SCFD2-201ENST00000388940 MPEG1Q2M385 716 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 IFI44LQ53G44 452 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 TRIM40Q6P9F5 258 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 LCTLQ6UWM7 567 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 ZNF852Q6ZMS4 543 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 TRMT11Q7Z4G4 463 aaKnown RBP14.33□□□□□ -0.12
SCFD2-201ENST00000388940 PARP8Q8N3A8 854 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 ZNF540Q8NDQ6 660 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 ABHD11Q8NFV4 315 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 WDR48Q8TAF3 677 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 GIPC3Q8TF64 312 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 PPP1R16AQ96I34 528 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 OR51B5Q9H339 312 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 THSD1Q9NS62 852 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 TAS2R9Q9NYW1 312 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 RAPGEFL1Q9UHV5 662 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 TNFRSF11BO00300 401 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 FAM20BO75063 409 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 WBP4O75554 376 aaKnown RBP14.33□□□□□ -0.12
SCFD2-201ENST00000388940 FSHRP23945 695 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 AQP1P29972 269 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 MLLT10P55197 1068 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 SCARB2Q14108 478 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 ELAVL3Q14576 367 aaKnown RBP14.33□□□□□ -0.12
SCFD2-201ENST00000388940 ZNF630Q2M218 657 aaPredicted RBP14.33□□□□□ -0.12
SCFD2-201ENST00000388940 FNDC3BQ53EP0 1204 aaKnown RBP14.33□□□□□ -0.12
SCFD2-201ENST00000388940 CRB2Q5IJ48 1285 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 MLIPQ5VWP3 458 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.33□□□□□ -0.12
SCFD2-201ENST00000388940 SLC15A4Q8N697 577 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 OR4C15Q8NGM1 316 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 SPPL2AQ8TCT8 520 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 FAM129BQ96TA1 746 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 SPNS1Q9H2V7 528 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 ICKQ9UPZ9 632 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 PCDHGA6Q9Y5G7 932 aa14.33□□□□□ -0.12
SCFD2-201ENST00000388940 PDE4DIPQ5VU43 2346 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 LZTS3O60299 673 aaPredicted RBP14.32□□□□□ -0.12
SCFD2-201ENST00000388940 PCDHGA12O60330 932 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 MMP20O60882 483 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 ZBTB11O95625 1053 aaPredicted RBP14.32□□□□□ -0.12
SCFD2-201ENST00000388940 MT-ND2P03891 347 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 ANXA8P13928 327 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 KRT20P35900 424 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 MAP2K4P45985 399 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 MASP1P48740 699 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 TAS2R50P59544 299 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 MC1RQ01726 317 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 RPA4Q13156 261 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 TSTA3Q13630 321 aaPredicted RBP14.32□□□□□ -0.12
SCFD2-201ENST00000388940 CLCA4Q14CN2 919 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 EIF4HQ15056 248 aaKnown RBP14.32□□□□□ -0.12
SCFD2-201ENST00000388940 C11orf96Q7Z7L8 435 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 FAM129CQ86XR2 697 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 ENTHD1Q8IYW4 607 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 RAD51AP1Q96B01 352 aa14.32□□□□□ -0.12
SCFD2-201ENST00000388940 RSPRY1Q96DX4 576 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms