RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 CKAP5Q14008 2032 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 RFXANKO14593 260 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 LATO43561 262 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 UMPSP11172 480 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 ENDOUP21128 410 aaKnown RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 CXCR2P25025 360 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 PTPN6P29350 595 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 NUMA1Q14980 2115 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 LRIF1Q5T3J3 769 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 TMEM132CQ8N3T6 1108 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 FAM86B1Q8N7N1 296 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 TFGQ92734 400 aaPredicted RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 FKBP10Q96AY3 582 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 C11orf24Q96F05 449 aaPredicted RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 CNDP2Q96KP4 475 aaKnown RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 HHIPQ96QV1 700 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 SH3GL1Q99961 368 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 WDR26Q9H7D7 661 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 KAT8Q9H7Z6 458 aaKnown RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 MARCH7Q9H992 704 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 CD320Q9NPF0 282 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 CARD8Q9Y2G2 431 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 F5P12259 2224 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 ELOVL7A1L3X0 281 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 PIPSLA2A3N6 862 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 SAP18O00422 153 aaKnown RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 HSD3B1P14060 373 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 HSD3B2P26439 372 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 SERPINB1P30740 379 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 RPS9P46781 194 aaKnown RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 COPZ1P61923 177 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 LSM3P62310 102 aaKnown RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 SLC14A1Q13336 389 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 HKDC1Q2TB90 917 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 PAGE2BQ5JRK9 111 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 BROXQ5VW32 411 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 TMEM236Q5W0B7 351 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 ZNF776Q68DI1 518 aaPredicted RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 TBPL2Q6SJ96 375 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 UNC5DQ6UXZ4 953 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 ZCCHC7Q8N3Z6 543 aaKnown RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 MFSD4AQ8N468 514 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 MINDY2Q8NBR6 621 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 PAPD5Q8NDF8 572 aaKnown RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 ZNF740Q8NDX6 193 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 OR7G1Q8NGA0 311 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 OR14C36Q8NHC7 312 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 FBXO30Q8TB52 745 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 SLC5A11Q8WWX8 675 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 CARS2Q9HA77 564 aaKnown RBP13.69□□□□□ -0.22
CLCN4-201ENST00000380829 FBXL12Q9NXK8 326 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 CLDND1Q9NY35 253 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 BTBD3Q9Y2F9 522 aa13.69□□□□□ -0.22
CLCN4-201ENST00000380829 TICRRQ7Z2Z1 1910 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 GBAP04062 536 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 ANXA4P09525 319 aaPredicted RBP13.68□□□□□ -0.22
CLCN4-201ENST00000380829 C1GALT1C1LP0DN25 315 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 FCGR1AP12314 374 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 MYCLP1P12525 358 aaPredicted RBP13.68□□□□□ -0.22
CLCN4-201ENST00000380829 CDH1P12830 882 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 HOXB9P17482 250 aaPredicted RBP13.68□□□□□ -0.22
CLCN4-201ENST00000380829 MTAPQ13126 283 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 TMEM196Q5HYL7 178 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 ATG9BQ674R7 924 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 ENPP6Q6UWR7 440 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 SPRED1Q7Z699 444 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 TBC1D21Q8IYX1 336 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 CLECL1Q8IZS7 167 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 NELL1Q92832 810 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 RAD51AP1Q96B01 352 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 FAM120BQ96EK7 910 aaKnown RBP13.68□□□□□ -0.22
CLCN4-201ENST00000380829 CCDC115Q96NT0 180 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 PANX1Q96RD7 426 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 MYOCQ99972 504 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 ALOXE3Q9BYJ1 711 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 LTB4R2Q9NPC1 389 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 LIMD1Q9UGP4 676 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 ADGRE2Q9UHX3 823 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 GNG14A0A1W2PPG7 69 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 YY2O15391 372 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 TGFB1P01137 390 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 LAMP1P11279 417 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 MAT2AP31153 395 aaKnown RBP13.68□□□□□ -0.22
CLCN4-201ENST00000380829 NUP214P35658 2090 aaPredicted RBP13.68□□□□□ -0.22
CLCN4-201ENST00000380829 WNT3P56703 355 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 CCDC58Q4VC31 144 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 OTUD3Q5T2D3 398 aaPredicted RBP13.68□□□□□ -0.22
CLCN4-201ENST00000380829 USP51Q70EK9 711 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 R3HCC1LQ7Z5L2 792 aaKnown RBP13.68□□□□□ -0.22
CLCN4-201ENST00000380829 DCUN1D3Q8IWE4 304 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 IQCF2Q8IXL9 164 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 MICU2Q8IYU8 434 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 NDNFQ8TB73 568 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 CHTF18Q8WVB6 975 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 NCLNQ969V3 563 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 NRBF2Q96F24 287 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 TEX101Q9BY14 249 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 OR51B5Q9H339 312 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 OSGEPL1Q9H4B0 414 aa13.68□□□□□ -0.22
CLCN4-201ENST00000380829 FZD3Q9NPG1 666 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms