RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 XIRP2A4UGR9 3374 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 A0A1W2PPV9 198 aa22.11■■□□□ 1.13
VPS16-201ENST00000380443 CACNB4O00305 520 aaPredicted RBP22.11■■□□□ 1.13
VPS16-201ENST00000380443 KLHL18O94889 574 aa22.11■■□□□ 1.13
VPS16-201ENST00000380443 CEACAM5P06731 702 aa22.11■■□□□ 1.13
VPS16-201ENST00000380443 NELFEP18615 380 aaKnown RBP22.11■■□□□ 1.13
VPS16-201ENST00000380443 RAB28P51157 221 aa22.11■■□□□ 1.13
VPS16-201ENST00000380443 RBM48Q5RL73 367 aaKnown RBP22.11■■□□□ 1.13
VPS16-201ENST00000380443 TMEM26Q6ZUK4 368 aa22.11■■□□□ 1.13
VPS16-201ENST00000380443 CACUL1Q86Y37 369 aa22.11■■□□□ 1.13
VPS16-201ENST00000380443 C8orf59Q8N0T1 100 aaPredicted RBP22.11■■□□□ 1.13
VPS16-201ENST00000380443 ARL10Q8N8L6 244 aa22.11■■□□□ 1.13
VPS16-201ENST00000380443 EZH1Q92800 747 aaPredicted RBP22.11■■□□□ 1.13
VPS16-201ENST00000380443 CAMK1GQ96NX5 476 aa22.11■■□□□ 1.13
VPS16-201ENST00000380443 INSM2Q96T92 566 aaPredicted RBP22.11■■□□□ 1.13
VPS16-201ENST00000380443 TRIM4Q9C037 500 aa22.11■■□□□ 1.13
VPS16-201ENST00000380443 UTS2RQ9UKP6 389 aa22.11■■□□□ 1.13
VPS16-201ENST00000380443 EME2A4GXA9 379 aaPredicted RBP22.1■■□□□ 1.13
VPS16-201ENST00000380443 CAPN5O15484 640 aaPredicted RBP22.1■■□□□ 1.13
VPS16-201ENST00000380443 NOBOXO60393 691 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 OR6B1O95007 311 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 ACP5P13686 325 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 DNAJA1P31689 397 aaKnown RBP22.1■■□□□ 1.13
VPS16-201ENST00000380443 PEX19P40855 299 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 TRA2BP62995 288 aaKnown RBP22.1■■□□□ 1.13
VPS16-201ENST00000380443 HBA1P69905 142 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 GAB1Q13480 694 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 TMEM196Q5HYL7 178 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 USP30Q70CQ3 517 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 LMNTD1Q8N9Z9 388 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 OR2L8Q8NGY9 312 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 APOOQ9BUR5 198 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 ACAT2Q9BWD1 397 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 MKRN2Q9H000 416 aaKnown RBP22.1■■□□□ 1.13
VPS16-201ENST00000380443 MIEF1Q9NQG6 463 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 HEBP2Q9Y5Z4 205 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 A0A1W2PRB8 838 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 SAP18O00422 153 aaKnown RBP22.1■■□□□ 1.13
VPS16-201ENST00000380443 SUV39H1O43463 412 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 SEC24DO94855 1032 aaPredicted RBP22.1■■□□□ 1.13
VPS16-201ENST00000380443 C6orf47O95873 294 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 TPP2P29144 1249 aaPredicted RBP22.1■■□□□ 1.13
VPS16-201ENST00000380443 HLCSP50747 726 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 ADPRHP54922 357 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 PRDX1Q06830 199 aaKnown RBP22.1■■□□□ 1.13
VPS16-201ENST00000380443 HEPACAMQ14CZ8 416 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 GCNT6Q5T4J0 391 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 B3GNT6Q6ZMB0 384 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 RGMAQ96B86 450 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 NECTIN4Q96NY8 510 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 SLC35A5Q9BS91 424 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 NCKAP1Q9Y2A7 1128 aa22.1■■□□□ 1.13
VPS16-201ENST00000380443 A0A1B0GTW7 788 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 ANHXE9PGG2 379 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 SLC16A6O15403 523 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 TNFRSF21O75509 655 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 CLEC3AO75596 197 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 IL3P08700 152 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 DDCP20711 480 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 FPR1P21462 350 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 RPL10P27635 214 aaKnown RBP22.09■■□□□ 1.13
VPS16-201ENST00000380443 PKLRP30613 574 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 LTBRP36941 435 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 ABATP80404 500 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 ROR2Q01974 943 aaKnown RBP22.09■■□□□ 1.13
VPS16-201ENST00000380443 TOP3AQ13472 1001 aaPredicted RBP22.09■■□□□ 1.13
VPS16-201ENST00000380443 HTR4Q13639 388 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 NUMA1Q14980 2115 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 ZIK1Q3SY52 487 aaPredicted RBP22.09■■□□□ 1.13
VPS16-201ENST00000380443 KIAA1211LQ6NV74 962 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 CCDC80Q76M96 950 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.09■■□□□ 1.13
VPS16-201ENST00000380443 OFCC1Q8IZS5 231 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 HSH2DQ96JZ2 352 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 MUS81Q96NY9 551 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 ING2Q9H160 280 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 SMURF2Q9HAU4 748 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 TRPV5Q9NQA5 729 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 PRDM6Q9NQX0 595 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.09■■□□□ 1.13
VPS16-201ENST00000380443 CEPT1Q9Y6K0 416 aa22.09■■□□□ 1.13
VPS16-201ENST00000380443 PLPP1O14494 284 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 FKBP9O95302 570 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 IFNA14P01570 189 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 ITGAMP11215 1152 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 UQCRC2P22695 453 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 BSGP35613 385 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 IGFALSP35858 605 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 ARFIP1P53367 373 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 MVDP53602 400 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 ZNF630Q2M218 657 aaPredicted RBP22.08■■□□□ 1.13
VPS16-201ENST00000380443 UAP1L1Q3KQV9 507 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 DCP2Q8IU60 420 aaKnown RBP22.08■■□□□ 1.13
VPS16-201ENST00000380443 NAGSQ8N159 534 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 C2orf73Q8N5S3 287 aaPredicted RBP22.08■■□□□ 1.13
VPS16-201ENST00000380443 DENND6BQ8NEG7 585 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 DPH2Q9BQC3 489 aaPredicted RBP22.08■■□□□ 1.13
VPS16-201ENST00000380443 OSGEPL1Q9H4B0 414 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 WDR37Q9Y2I8 494 aa22.08■■□□□ 1.13
VPS16-201ENST00000380443 MAGED1Q9Y5V3 778 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms