RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 IKBKGQ9Y6K9 419 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 DYTNA2CJ06 578 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 ANKDD1BA6NHY2 528 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 MAGEB17A8MXT2 336 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 PSMD12O00232 456 aaPredicted RBP15.85■□□□□ 0.13
HMGN4-201ENST00000377575 CHST10O43529 356 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 CLEC3AO75596 197 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 SEC24DO94855 1032 aaPredicted RBP15.85■□□□□ 0.13
HMGN4-201ENST00000377575 INHBAP08476 426 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 RNH1P13489 461 aaKnown RBP15.85■□□□□ 0.13
HMGN4-201ENST00000377575 GMPRP36959 345 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 RAB8AP61006 207 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 OLR1P78380 273 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 ARG2P78540 354 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 ZNF169Q14929 603 aaPredicted RBP15.85■□□□□ 0.13
HMGN4-201ENST00000377575 TLR1Q15399 786 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 NSDHLQ15738 373 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 HIST2H2ACQ16777 129 aaPredicted RBP15.85■□□□□ 0.13
HMGN4-201ENST00000377575 B3GNTL1Q67FW5 361 aaPredicted RBP15.85■□□□□ 0.13
HMGN4-201ENST00000377575 PLAG1Q6DJT9 500 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 HIST2H2AA3Q6FI13 130 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 CENPLQ8N0S6 344 aaPredicted RBP15.85■□□□□ 0.13
HMGN4-201ENST00000377575 SIRT6Q8N6T7 355 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 PLPP5Q8NEB5 264 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 RHEBL1Q8TAI7 183 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 KCTD4Q8WVF5 259 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 ESAMQ96AP7 390 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 NXNL1Q96CM4 212 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 WDR34Q96EX3 536 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 IMMP1LQ96LU5 166 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 KLHL31Q9H511 634 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 LANCL2Q9NS86 450 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 TEKT2Q9UIF3 430 aa15.85■□□□□ 0.13
HMGN4-201ENST00000377575 A0A096LPK6 155 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 IGHV3-20A0A0C4DH32 117 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 UBXN8O00124 270 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 ERI3O43414 337 aaKnown RBP15.84■□□□□ 0.13
HMGN4-201ENST00000377575 B3GALT4O96024 378 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 C2P06681 752 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 CELA2AP08217 269 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 SMIM10L1P0DMW3 83 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 ITGAMP11215 1152 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 TYK2P29597 1187 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 ECHS1P30084 290 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 GLRBP48167 497 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 SERPINB9P50453 376 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 IRF9Q00978 393 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 IRF8Q02556 426 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 ACAP2Q15057 778 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 TBCCQ15814 346 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 EXT1Q16394 746 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 BTBD16Q32M84 506 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 TRIM40Q6P9F5 258 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 QSOX2Q6ZRP7 698 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 SHISA5Q8N114 240 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 SLC44A1Q8WWI5 657 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 PSMF1Q92530 271 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 SNRNP40Q96DI7 357 aaKnown RBP15.84■□□□□ 0.13
HMGN4-201ENST00000377575 SMIM10Q96HG1 83 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 LPAR4Q99677 370 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 OPTCQ9UBM4 332 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 CSAG2Q9Y5P2 127 aa15.84■□□□□ 0.13
HMGN4-201ENST00000377575 FLNBO75369 2602 aaKnown RBP15.83■□□□□ 0.13
HMGN4-201ENST00000377575 HMX2A2RU54 273 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 LRIT2A6NDA9 550 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 OR2W5A6NFC9 320 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 K7EPI3 171 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 KLHL2O95198 593 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 ALDOAP04075 364 aaKnown RBP15.83■□□□□ 0.12
HMGN4-201ENST00000377575 GNLYP22749 145 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 TSFMP43897 325 aaKnown RBP15.83■□□□□ 0.12
HMGN4-201ENST00000377575 UQCRFS1P47985 274 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 KCNC1P48547 511 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 ACTN3Q08043 901 aaPredicted RBP15.83■□□□□ 0.12
HMGN4-201ENST00000377575 TGM3Q08188 693 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 CHIT1Q13231 466 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 DOC2AQ14183 400 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 SFT2D3Q587I9 215 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 UBAP2Q5T6F2 1119 aaKnown RBP15.83■□□□□ 0.12
HMGN4-201ENST00000377575 ABHD17BQ5VST6 288 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 PAPD4Q6PIY7 484 aaKnown RBP15.83■□□□□ 0.12
HMGN4-201ENST00000377575 CISD2Q8N5K1 135 aaKnown RBP15.83■□□□□ 0.12
HMGN4-201ENST00000377575 ADAMTS18Q8TE60 1221 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 TSLPQ969D9 159 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 UBE2E3Q969T4 207 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 MS4A6EQ96DS6 147 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 PAFAH2Q99487 392 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 NPLQ9BXD5 320 aaPredicted RBP15.83■□□□□ 0.12
HMGN4-201ENST00000377575 REXO4Q9GZR2 422 aaKnown RBP15.83■□□□□ 0.12
HMGN4-201ENST00000377575 PRM3Q9NNZ6 103 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 AGPAT4Q9NRZ5 378 aa15.83■□□□□ 0.12
HMGN4-201ENST00000377575 COPG1Q9Y678 874 aaKnown RBP15.83■□□□□ 0.12
HMGN4-201ENST00000377575 ESPL1Q14674 2120 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 A0A087WUV0 522 aaPredicted RBP15.82■□□□□ 0.12
HMGN4-201ENST00000377575 C4orf51C9J302 202 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 PRMT3O60678 531 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 B4GALT2O60909 372 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 KRT38O76015 456 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 GFAPP14136 432 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 CNTFP26441 200 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms