RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TINAGQ9UJW2 476 aa18.01■□□□□ 0.47
CBWD3-204ENST00000377349 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.01■□□□□ 0.47
CBWD3-204ENST00000377349 HCFC1P51610 2035 aa18.01■□□□□ 0.47
CBWD3-204ENST00000377349 MTORP42345 2549 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 B3GALT4O96024 378 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 AGTR2P50052 363 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 RGS1Q08116 209 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 RBBP5Q15291 538 aaKnown RBP18■□□□□ 0.47
CBWD3-204ENST00000377349 TSNQ15631 228 aaKnown RBP18■□□□□ 0.47
CBWD3-204ENST00000377349 DEFB134Q4QY38 66 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 Q6ZPB1 254 aaPredicted RBP18■□□□□ 0.47
CBWD3-204ENST00000377349 MAATS1Q7Z4T9 603 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 CEP97Q8IW35 865 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 SPATA6LQ8N4H0 392 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 SPATA4Q8NEY3 305 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 OR5T3Q8NGG3 340 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 M1APQ8TC57 530 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 ADAMTS18Q8TE60 1221 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 THAP3Q8WTV1 239 aaPredicted RBP18■□□□□ 0.47
CBWD3-204ENST00000377349 CDKL2Q92772 493 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 GPR137Q96N19 417 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 FRMD6Q96NE9 622 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 ERP44Q9BS26 406 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 SPNS1Q9H2V7 528 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 KCNK13Q9HB14 408 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 CHST11Q9NPF2 352 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 SLC22A14Q9Y267 594 aa18■□□□□ 0.47
CBWD3-204ENST00000377349 TRBC2A0A5B9 178 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 FAM187AA6NFU0 413 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 E7ESA3 106 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 WDR47O94967 919 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 SNRPB2P08579 225 aaKnown RBP17.99■□□□□ 0.47
CBWD3-204ENST00000377349 ZNF888P0CJ79 500 aaPredicted RBP17.99■□□□□ 0.47
CBWD3-204ENST00000377349 MYBL2P10244 700 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 RBPJQ06330 500 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 FRG1Q14331 258 aaKnown RBP17.99■□□□□ 0.47
CBWD3-204ENST00000377349 OR1C1Q15619 314 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 EXT1Q16394 746 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 C18orf21Q32NC0 220 aaPredicted RBP17.99■□□□□ 0.47
CBWD3-204ENST00000377349 SFT2D3Q587I9 215 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 PAPD4Q6PIY7 484 aaKnown RBP17.99■□□□□ 0.47
CBWD3-204ENST00000377349 SYT10Q6XYQ8 523 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 GDF7Q7Z4P5 450 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 SIAH3Q8IW03 269 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 CHERPQ8IWX8 916 aaKnown RBP17.99■□□□□ 0.47
CBWD3-204ENST00000377349 CTAGE3PQ8IX95 158 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 ZNF295-AS1Q8N0V1 137 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 AFAP1L2Q8N4X5 818 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 PLPP5Q8NEB5 264 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 ANKRD49Q8WVL7 239 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 CCT6BQ92526 530 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 EXT2Q93063 718 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 TSLPQ969D9 159 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 PHF12Q96QT6 1004 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 RHBGQ9H310 441 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 RHOJQ9H4E5 214 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 RUBCNLQ9H714 662 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 KLHL1Q9NR64 748 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 SMYD2Q9NRG4 433 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 MOCS1Q9NZB8 636 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 SLC22A7Q9Y694 548 aa17.99■□□□□ 0.47
CBWD3-204ENST00000377349 PHF3Q92576 2039 aaKnown RBP17.99■□□□□ 0.47
CBWD3-204ENST00000377349 C19orf84I3L1E1 186 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 PHGDHO43175 533 aaKnown RBP17.98■□□□□ 0.47
CBWD3-204ENST00000377349 DNAJB6O75190 326 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 NEURL1O76050 574 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 RAB8AP61006 207 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 ACTN3Q08043 901 aaPredicted RBP17.98■□□□□ 0.47
CBWD3-204ENST00000377349 USP10Q14694 798 aaKnown RBP17.98■□□□□ 0.47
CBWD3-204ENST00000377349 ABRAXAS2Q15018 415 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 HERC3Q15034 1050 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 MEP1AQ16819 746 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 PPP1R3AQ16821 1122 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 SPINK14Q6IE38 97 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 XKRXQ6PP77 449 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 ABHD11Q8NFV4 315 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 LURAP1Q96LR2 239 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 AIF1LQ9BQI0 150 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 FAM129AQ9BZQ8 928 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 TSPAN10Q9H1Z9 355 aaPredicted RBP17.98■□□□□ 0.47
CBWD3-204ENST00000377349 WHRNQ9P202 907 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 MTO1Q9Y2Z2 717 aaKnown RBP17.98■□□□□ 0.47
CBWD3-204ENST00000377349 UTP11Q9Y3A2 253 aaKnown RBP17.98■□□□□ 0.47
CBWD3-204ENST00000377349 CXorf49A8MYA2 514 aaPredicted RBP17.98■□□□□ 0.47
CBWD3-204ENST00000377349 B4GALT2O60909 372 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 AGAP20933 346 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 GDF5P43026 501 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 PLTPP55058 493 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 ZNF468Q5VIY5 522 aaPredicted RBP17.98■□□□□ 0.47
CBWD3-204ENST00000377349 ABHD13Q7L211 337 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 ADAMTSL2Q86TH1 951 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 PDLIM5Q96HC4 596 aaKnown RBP17.98■□□□□ 0.47
CBWD3-204ENST00000377349 OR1F2PQ96R84 312 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 UTP23Q9BRU9 249 aaKnown RBP17.98■□□□□ 0.47
CBWD3-204ENST00000377349 SARGQ9BW04 601 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 WWOXQ9NZC7 414 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 OARD1Q9Y530 152 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 KCNE2Q9Y6J6 123 aa17.98■□□□□ 0.47
CBWD3-204ENST00000377349 GABRR3A8MPY1 467 aa17.97■□□□□ 0.47
CBWD3-204ENST00000377349 MAGEB17A8MXT2 336 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms