RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 IRF5Q13568 498 aa13.27□□□□□ -0.29
COL4A1-201ENST00000375820 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.27□□□□□ -0.29
COL4A1-201ENST00000375820 CCDC58Q4VC31 144 aa13.27□□□□□ -0.29
COL4A1-201ENST00000375820 ZNF542PQ5EBM4 170 aa13.27□□□□□ -0.29
COL4A1-201ENST00000375820 UBQLNLQ8IYU4 475 aa13.27□□□□□ -0.29
COL4A1-201ENST00000375820 OR6Q1Q8NGQ2 317 aa13.27□□□□□ -0.29
COL4A1-201ENST00000375820 SLC25A44Q96H78 314 aaPredicted RBP13.27□□□□□ -0.29
COL4A1-201ENST00000375820 CAMK1GQ96NX5 476 aa13.27□□□□□ -0.29
COL4A1-201ENST00000375820 CDC14AQ9UNH5 594 aa13.27□□□□□ -0.29
COL4A1-201ENST00000375820 CREG1O75629 220 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 OGDHQ02218 1023 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 SLC30A8Q8IWU4 369 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 SPAG16Q8N0X2 631 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 GLIS1Q8NBF1 620 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 BIRC7Q96CA5 298 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 PTTG2Q9NZH5 202 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 ARHGAP23Q9P227 1491 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 H7BY64 318 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 CHRNA1P02708 482 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 KLK3P07288 261 aaPredicted RBP13.26□□□□□ -0.29
COL4A1-201ENST00000375820 ACADVLP49748 655 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 GRPEL2Q8TAA5 225 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 NINJ1Q92982 152 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 MR1Q95460 341 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 C7orf34Q96L11 122 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 PRAP1Q96NZ9 151 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 KCNH6Q9H252 994 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 GLTPD2A6NH11 291 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 CAPN14A8MX76 684 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 PROM1O43490 865 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 AOC1P19801 751 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 STOMP27105 288 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 TDRPQ86YL5 185 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 SLC5A11Q8WWX8 675 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 ASB9Q96DX5 294 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 ZNF649Q9BS31 505 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 ENAMQ9NRM1 1142 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 HCN2Q9UL51 889 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 CYP8B1Q9UNU6 501 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 RCBTB2O95199 551 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 TFPTP0C1Z6 253 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 RPL19P84098 196 aaKnown RBP13.26□□□□□ -0.29
COL4A1-201ENST00000375820 GHRHRQ02643 423 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 HERC3Q15034 1050 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 DNM1P34Q6PK57 102 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 OR2AP1Q8NGE2 309 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 EPYCQ99645 322 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 CMKLR1Q99788 373 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 C11orf49Q9H6J7 331 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 FBRSL1Q9HCM7 1045 aaKnown RBP13.26□□□□□ -0.29
COL4A1-201ENST00000375820 SLC22A1O15245 554 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 COQ9O75208 318 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 RAB36O95755 333 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 ERI1Q8IV48 349 aaKnown RBP13.26□□□□□ -0.29
COL4A1-201ENST00000375820 KRTCAP2Q8N6L1 136 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 TMEM80Q96HE8 168 aa13.26□□□□□ -0.29
COL4A1-201ENST00000375820 FEZF1A0PJY2 475 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 OR12D1P0DN82 309 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 C1orf61Q13536 156 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 BTBD16Q32M84 506 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 SLC39A4Q6P5W5 647 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 LAS2Q8IYD9 372 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 CNIH3Q8TBE1 160 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 AURKBQ96GD4 344 aaPredicted RBP13.25□□□□□ -0.29
COL4A1-201ENST00000375820 TMEM68Q96MH6 324 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 MYEF2Q9P2K5 600 aaKnown RBP13.25□□□□□ -0.29
COL4A1-201ENST00000375820 PTGDR2Q9Y5Y4 395 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 SOX30O94993 753 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 IFNA7P01567 189 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 CFL1P23528 166 aaKnown RBP13.25□□□□□ -0.29
COL4A1-201ENST00000375820 RFTN1Q14699 578 aaPredicted RBP13.25□□□□□ -0.29
COL4A1-201ENST00000375820 TMEM225Q6GV28 225 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 XKR5Q6UX68 686 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 PIGWQ7Z7B1 504 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 POLDIP3Q9BY77 421 aaKnown RBP13.25□□□□□ -0.29
COL4A1-201ENST00000375820 ANKRD66B4E2M5 251 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 CNOT4O95628 575 aaKnown RBP13.25□□□□□ -0.29
COL4A1-201ENST00000375820 ZNF12P17014 697 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 E2F1Q01094 437 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 ST3GAL3Q11203 375 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 FAM180BQ6P0A1 224 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 NCEH1Q6PIU2 408 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 FIP1L1Q6UN15 594 aaKnown RBP13.25□□□□□ -0.29
COL4A1-201ENST00000375820 TRIB2Q92519 343 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 NSMAFQ92636 917 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 ATG5Q9H1Y0 275 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 TPT1P8Q9HAU6 139 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 ZNF451Q9Y4E5 1061 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 MST1RQ04912 1400 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 MATN2O00339 956 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 ATP6V1G1O75348 118 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 MAGEA8P43361 318 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 DPY19L1Q2PZI1 675 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 CYBRD1Q53TN4 286 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 TUBA8Q9NY65 449 aaPredicted RBP13.25□□□□□ -0.29
COL4A1-201ENST00000375820 GJD2Q9UKL4 321 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 A0A1W2PQ45 241 aaPredicted RBP13.25□□□□□ -0.29
COL4A1-201ENST00000375820 A0A1W2PQY0 241 aa13.25□□□□□ -0.29
COL4A1-201ENST00000375820 RBM47A0AV96 593 aaKnown RBP13.25□□□□□ -0.29
COL4A1-201ENST00000375820 TOXO94900 526 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms