RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 B3GNT3Q9Y2A9 372 aa16.21■□□□□ 0.19
VARS-215ENST00000375663 OMPP47874 163 aa16.21■□□□□ 0.19
VARS-215ENST00000375663 SKP1P63208 163 aa16.21■□□□□ 0.19
VARS-215ENST00000375663 ADNP2Q6IQ32 1131 aa16.21■□□□□ 0.19
VARS-215ENST00000375663 OR10G6Q8NH81 332 aa16.21■□□□□ 0.19
VARS-215ENST00000375663 RERGQ96A58 199 aaPredicted RBP16.21■□□□□ 0.19
VARS-215ENST00000375663 RHBDF1Q96CC6 855 aa16.21■□□□□ 0.19
VARS-215ENST00000375663 PIP5K1AQ99755 562 aa16.21■□□□□ 0.19
VARS-215ENST00000375663 PCBD2Q9H0N5 130 aa16.21■□□□□ 0.19
VARS-215ENST00000375663 ZNF840PA6NDX5 716 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 CLCA1A8K7I4 914 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 HIST1H2ABP04908 130 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 HMGN1P05114 100 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 RB1P06400 928 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 ATXN1LP0C7T5 689 aaKnown RBP16.21■□□□□ 0.18
VARS-215ENST00000375663 ZNF30P17039 623 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 PSMA3P25788 255 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 TIA1P31483 386 aaKnown RBP eCLIP16.21■□□□□ 0.18
VARS-215ENST00000375663 VIPR1P32241 457 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 ZNF140P52738 457 aaPredicted RBP16.21■□□□□ 0.18
VARS-215ENST00000375663 GMFBP60983 142 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 MEF2AQ02078 507 aaPredicted RBP16.21■□□□□ 0.18
VARS-215ENST00000375663 HIST3H2AQ7L7L0 130 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 IQCHQ86VS3 1027 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 NATD1Q8N6N6 113 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 HIST1H2ACQ93077 130 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 WACQ9BTA9 647 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 NEUROD4Q9HD90 331 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 COMMD9Q9P000 198 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 CARD8Q9Y2G2 431 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 PCDHGB5Q9Y5G0 923 aa16.21■□□□□ 0.18
VARS-215ENST00000375663 EVPLQ92817 2033 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 KIAA0100Q14667 2235 aaKnown RBP16.2■□□□□ 0.18
VARS-215ENST00000375663 GPR39O43194 453 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 PTTG1O95997 202 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 ALPPP05187 535 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 ETFAP13804 333 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 GATMP50440 423 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 CDH11P55287 796 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 CRHR2Q13324 411 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 MAB21L1Q13394 359 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 NCEH1Q6PIU2 408 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 OR8H3Q8N146 312 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 C11orf84Q9BUA3 381 aaPredicted RBP16.2■□□□□ 0.18
VARS-215ENST00000375663 TRMT61BQ9BVS5 477 aaKnown RBP16.2■□□□□ 0.18
VARS-215ENST00000375663 FBXO10Q9UK96 956 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 APOL3O95236 402 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 PCCBP05166 539 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 BPIP17213 487 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 IDSP22304 550 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 CRISP1P54107 249 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 FADDQ13158 208 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 GINS1Q14691 196 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 SLC9A5Q14940 896 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 NDUFA9Q16795 377 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 RTL4Q6ZR62 310 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 CHPT1Q8WUD6 406 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 DPF3Q92784 378 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 CLIP3Q96DZ5 547 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 PAPPAQ13219 1627 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 SMCHD1A6NHR9 2005 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 HCN1O60741 890 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 GJB3O75712 270 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 POP7O75817 140 aaKnown RBP16.2■□□□□ 0.18
VARS-215ENST00000375663 IFNA16P05015 189 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 TNFRSF1BP20333 461 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 ARNTP27540 789 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 ACSL1P33121 698 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 CBLBQ13191 982 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 KCNC3Q14003 757 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 PLPP4Q5VZY2 271 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 ZNF783Q6ZMS7 281 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 OR4C6Q8NH72 309 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 LRRC20Q8TCA0 184 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 SLC5A11Q8WWX8 675 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 TNFRSF10DQ9UBN6 386 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 TAC3Q9UHF0 121 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 PTPRZ1P23471 2315 aaPredicted RBP16.2■□□□□ 0.18
VARS-215ENST00000375663 NUMA1Q14980 2115 aa16.2■□□□□ 0.18
VARS-215ENST00000375663 MROH6A6NGR9 719 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 SEMA3DO95025 777 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 RYKP34925 604 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 KEAP1Q14145 624 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 MAD2L1BPQ15013 274 aaPredicted RBP16.19■□□□□ 0.18
VARS-215ENST00000375663 ARL9Q6T311 187 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 IFT27Q9BW83 186 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 UCKL1Q9NWZ5 548 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 PCDHGB6Q9Y5F9 930 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 CEP290O15078 2479 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 FAM170BA6NMN3 283 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 TLL1O43897 1013 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 CTNNB1P35222 781 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 CCR8P51685 355 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 TBC1D25Q3MII6 688 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 HLA-DQA1Q5Y7H0 255 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 RANBP3LQ86VV4 465 aaPredicted RBP16.19■□□□□ 0.18
VARS-215ENST00000375663 LINC00471Q8N535 108 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 SLC37A3Q8NCC5 494 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 CYB5D2Q8WUJ1 264 aa16.19■□□□□ 0.18
VARS-215ENST00000375663 RGMAQ96B86 450 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms