RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 PMP22Q01453 160 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 POU4F1Q01851 419 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 OR1C1Q15619 314 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 CYP4X1Q8N118 509 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 SLC5A8Q8N695 610 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 ELP5Q8TE02 316 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 RELTQ969Z4 430 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 PDLIM2Q96JY6 352 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 ERP44Q9BS26 406 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 AICDAQ9GZX7 198 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 DPH5Q9H2P9 285 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 RHBGQ9H310 441 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 CDCP1Q9H5V8 836 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 POPDC3Q9HBV1 291 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 SAYSD1Q9NPB0 183 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 SEC14L3Q9UDX4 400 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 PCDHGB6Q9Y5F9 930 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 SCN2AQ99250 2005 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 TRGV8A0A0C4DH27 118 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 C4orf51C9J302 202 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 PSMD12O00232 456 aaPredicted RBP13.35□□□□□ -0.27
NELFE-201ENST00000375425 H2AFYO75367 372 aaKnown RBP13.35□□□□□ -0.27
NELFE-201ENST00000375425 MAOAP21397 527 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 TAS2R50P59544 299 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 BTN3A2P78410 334 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 CALCOCO2Q13137 446 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 TGFBIQ15582 683 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 TOR1AIP1Q5JTV8 583 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 SLCO4C1Q6ZQN7 724 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 QSOX2Q6ZRP7 698 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 RPS19BP1Q86WX3 136 aaKnown RBP13.35□□□□□ -0.27
NELFE-201ENST00000375425 CA13Q8N1Q1 262 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 KIF2BQ8N4N8 673 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 MDS2Q8NDY4 140 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 HES7Q9BYE0 225 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 DERL2Q9GZP9 239 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 CAB39LQ9H9S4 337 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 KLHL1Q9NR64 748 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 WHRNQ9P202 907 aa13.35□□□□□ -0.27
NELFE-201ENST00000375425 CACNA1DQ01668 2161 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 FAM187AA6NFU0 413 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 GABRR3A8MPY1 467 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 WISP3O95389 354 aaPredicted RBP13.34□□□□□ -0.27
NELFE-201ENST00000375425 CCDC166P0CW27 439 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 RNH1P13489 461 aaKnown RBP13.34□□□□□ -0.27
NELFE-201ENST00000375425 OC90Q02509 493 aaPredicted RBP13.34□□□□□ -0.27
NELFE-201ENST00000375425 ILF2Q12905 390 aaKnown RBP13.34□□□□□ -0.27
NELFE-201ENST00000375425 TMIGD1Q6UXZ0 262 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 C3orf62Q6ZUJ4 267 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 MAATS1Q7Z4T9 603 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 LURAP1LQ8IV03 231 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 KLHDC8AQ8IYD2 350 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 SPATA4Q8NEY3 305 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 CDKL2Q92772 493 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 SCMH1Q96GD3 660 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 CAPS2Q9BXY5 557 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 NECTIN3Q9NQS3 549 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 PRDM9Q9NQV7 894 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 TXNDC16Q9P2K2 825 aa13.34□□□□□ -0.27
NELFE-201ENST00000375425 IGKV3D-11A0A0A0MRZ8 115 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 TCRBV16S1A1N1A0A5B0 115 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 A8MUA0 341 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 EIF3HO15372 352 aaKnown RBP eCLIP13.33□□□□□ -0.28
NELFE-201ENST00000375425 TAPBPO15533 448 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 PHGDHO43175 533 aaKnown RBP13.33□□□□□ -0.28
NELFE-201ENST00000375425 RAD51CO43502 376 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 NEURL1O76050 574 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 CD46P15529 392 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 EEF1DP29692 281 aaKnown RBP13.33□□□□□ -0.28
NELFE-201ENST00000375425 STXBP1P61764 594 aaKnown RBP13.33□□□□□ -0.28
NELFE-201ENST00000375425 RUNX2Q13950 521 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 SLBPQ14493 270 aaKnown RBP eCLIP13.33□□□□□ -0.28
NELFE-201ENST00000375425 FBXO48Q5FWF7 155 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 ZNF468Q5VIY5 522 aaPredicted RBP13.33□□□□□ -0.28
NELFE-201ENST00000375425 CYS1Q717R9 158 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.33□□□□□ -0.28
NELFE-201ENST00000375425 LGI4Q8N135 537 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 KRT78Q8N1N4 520 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 HORMAD2Q8N7B1 307 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 ARMC2Q8NEN0 867 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 NFAM1Q8NET5 270 aaPredicted RBP13.33□□□□□ -0.28
NELFE-201ENST00000375425 TTLQ8NG68 377 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 MS4A6EQ96DS6 147 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 FAR2Q96K12 515 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 CPNE1Q99829 537 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 LRFN1Q9P244 771 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 COPG2Q9UBF2 871 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 CPAMD8Q8IZJ3 1885 aa13.33□□□□□ -0.28
NELFE-201ENST00000375425 CROCCQ5TZA2 2017 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 A0A0G2JN53 185 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 TCRBV9S1A1TA0A576 114 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 LRIT2A6NDA9 550 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 SAGE2PA6NJ88 616 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 CCL21O00585 134 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 SP1P08047 785 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 CD1DP15813 335 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 STMN1P16949 149 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 HNRNPH1P31943 449 aaKnown RBP13.32□□□□□ -0.28
NELFE-201ENST00000375425 GGT5P36269 586 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 HSPA7P48741 367 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms