RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 P2RX2Q9UBL9 471 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 PCDHGA10Q9Y5H3 936 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 FAM170BA6NMN3 283 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 GTPBP1O00178 669 aaKnown RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 STX11O75558 287 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SSTR4P31391 388 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 DGKGP49619 791 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SGSHP51688 502 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 MAP4K2Q12851 820 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 NPRL3Q12980 569 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 CDK5R2Q13319 367 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SUZ12Q15022 739 aaKnown RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 LARS2Q15031 903 aaKnown RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 IKBIPQ70UQ0 350 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SPARTQ8N0X7 666 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 TCEANCQ8N8B7 351 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SNX33Q8WV41 574 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 KLHL6Q8WZ60 621 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 DOHHQ9BU89 302 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SDR39U1Q9NRG7 319 aaPredicted RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 INTS6Q9UL03 887 aaKnown RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 PCDHA9Q9Y5H5 950 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SLC9A3R1O14745 358 aaPredicted RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SLITRK5O94991 958 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 IFNGP01579 166 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 BPIP17213 487 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 TEAD2Q15562 447 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ODF4Q2M2E3 257 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 GPR33Q49SQ1 333 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF311Q5JNZ3 666 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 TOR1AIP1Q5JTV8 583 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 BICRALQ6AI39 1079 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 RANBP10Q6VN20 620 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 COLGALT2Q8IYK4 626 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 FAM46DQ8NEK8 389 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SLC5A11Q8WWX8 675 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SPACA7Q96KW9 195 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 TEX37Q96LM6 180 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SORBS1Q9BX66 1292 aaKnown RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 MMP28Q9H239 520 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 A0A1B0GVT2 93 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 C7P10643 843 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 STAT5AP42229 794 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 HLA-DQA1Q5Y7H0 255 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 FAM171BQ6P995 826 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 RANBP3LQ86VV4 465 aaPredicted RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 CHPFQ8IZ52 775 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 GAB3Q8WWW8 586 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 VAPAQ9P0L0 249 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SLC45A1Q9Y2W3 748 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 WNT9AO14904 365 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF865P0CJ78 1059 aaPredicted RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 STARP49675 285 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 PPP2R2BQ00005 443 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 MVKQ03426 396 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SP140Q13342 867 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 PAQR9Q6ZVX9 377 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 TICAM1Q8IUC6 712 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 GALNT13Q8IUC8 556 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SLC30A8Q8IWU4 369 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 PELI3Q8N2H9 469 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 MEIOBQ8N635 442 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 OR14C36Q8NHC7 312 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SCAMP4Q969E2 229 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 NELL2Q99435 816 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 NEK6Q9HC98 313 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 TTC34A8MYJ7 566 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 J3QLW9 94 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 C8AP07357 584 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF19P17023 458 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ID2Q02363 134 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 PPIGQ13427 754 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 RAB41Q5JT25 222 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF691Q5VV52 312 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 FAM46CQ5VWP2 391 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 DESI1Q6ICB0 168 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 PGM2L1Q6PCE3 622 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 TBPL2Q6SJ96 375 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 BEND5Q7L4P6 421 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 OR2AP1Q8NGE2 309 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 FANK1Q8TC84 345 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 LRRC20Q8TCA0 184 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SORCS1Q8WY21 1168 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 LGALS12Q96DT0 336 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 LMAN2LQ9H0V9 348 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 LEFTY2O00292 366 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SOCS7O14512 581 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 LAMP1P11279 417 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ETFAP13804 333 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 DCKP27707 260 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 RYKP34925 604 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 FKBP1BP68106 108 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SMU1Q2TAY7 513 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 PRR23CQ6ZRP0 262 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 FAM92BQ6ZTR7 304 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 MMAAQ8IVH4 418 aaKnown RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 POMGNT2Q8NAT1 580 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 AHCYL2Q96HN2 611 aaKnown RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 MAPKAP1Q9BPZ7 522 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms