RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 PEX12O00623 359 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 PPP6CO00743 305 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 ERI3O43414 337 aaKnown RBP19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 CHST10O43529 356 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 PLIN3O60664 434 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 JRKO75564 520 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 CLDN9O95484 217 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 IGHEP01854 428 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 IMPDH1P20839 514 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 XCR1P46094 333 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 CCNG1P51959 295 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 PRKAA2P54646 552 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 EMP2P54851 167 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 HERVK_113P63132 956 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 SKP1P63208 163 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 OLR1P78380 273 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 BTN3A2P78410 334 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 CHAF1BQ13112 559 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 CPSF6Q16630 551 aaKnown RBP eCLIP19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 ZNF678Q5SXM1 525 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 NIPAL1Q6NVV3 410 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 ZNF605Q86T29 641 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 SLC22A9Q8IVM8 553 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 APLFQ8IW19 511 aaPredicted RBP19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 IQCKQ8N0W5 287 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 GAL3ST3Q96A11 431 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 NACC2Q96BF6 587 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 F2RL3Q96RI0 385 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 ERVK-6Q9BXR3 956 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 MS4A8Q9BY19 250 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 TRIM55Q9BYV6 548 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 REXO4Q9GZR2 422 aaKnown RBP19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 ING2Q9H160 280 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 PCDHGA11Q9Y5H2 935 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 HS3ST3B1Q9Y662 390 aa19.84■□□□□ 0.77
MAP1LC3A-202ENST00000374837 A0A0G2JN53 185 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 IDSB3KWA1 339 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 H0YIV9 168 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 SOCS6O14544 535 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 HEXBP07686 556 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 PLA2G2AP14555 144 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 TSPAN8P19075 237 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 SERPINB1P30740 379 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 PLA2G16P53816 162 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 ZNF844Q08AG5 666 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 TRAF3Q13114 568 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 RBBP7Q16576 425 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 CCDC153Q494R4 210 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 KIRREL2Q6UWL6 708 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 ZYG11AQ6WRX3 759 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 MILR1Q7Z6M3 343 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 RNF175Q8N4F7 328 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 OR2L5Q8NG80 312 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 HUS1BQ8NHY5 278 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 PEX11GQ96HA9 241 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 TMEM237Q96Q45 408 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 MESP1Q9BRJ9 268 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 CLK4Q9HAZ1 481 aaKnown RBP19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 PRM3Q9NNZ6 103 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 RRAGDQ9NQL2 400 aaPredicted RBP19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 ADGRE2Q9UHX3 823 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 MKL2Q9ULH7 1088 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 TSC22D4Q9Y3Q8 395 aa19.83■□□□□ 0.77
MAP1LC3A-202ENST00000374837 MGAQ8IWI9 3026 aa19.83■□□□□ 0.76
MAP1LC3A-202ENST00000374837 CFAP46Q8IYW2 2715 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 A0A1B0GTL3 188 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 SH3BGRLO75368 114 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 DNAJB5O75953 348 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 SUPT7LO94864 414 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 TGFB1P01137 390 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 MYL2P10916 166 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 HPDP32754 393 aaPredicted RBP19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 ARL1P40616 181 aaPredicted RBP19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 PIK3CBP42338 1070 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 CCL11P51671 97 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 EFNA3P52797 238 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 CLCQ05315 142 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 DDX39BQ13838 428 aaKnown RBP19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 ZRSR2Q15696 482 aaKnown RBP19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 KRT71Q3SY84 523 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 ABHD17CQ6PCB6 329 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 MED25Q71SY5 747 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 UBE3DQ7Z6J8 389 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 SRRM1Q8IYB3 904 aaKnown RBP19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 TMEM102Q8N9M5 508 aaPredicted RBP19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 BANPQ8N9N5 519 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 TRPC4APQ8TEL6 797 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 PPP4R1Q8TF05 950 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 FAR2Q96K12 515 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 QRFPRQ96P65 431 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 SEMA4CQ9C0C4 833 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 ADNPQ9H2P0 1102 aa19.82■□□□□ 0.76
MAP1LC3A-202ENST00000374837 AGPSO00116 658 aa19.81■□□□□ 0.76
MAP1LC3A-202ENST00000374837 MASP2O00187 686 aa19.81■□□□□ 0.76
MAP1LC3A-202ENST00000374837 ERLIN1O75477 346 aa19.81■□□□□ 0.76
MAP1LC3A-202ENST00000374837 IL10P22301 178 aa19.81■□□□□ 0.76
MAP1LC3A-202ENST00000374837 RRADP55042 308 aa19.81■□□□□ 0.76
MAP1LC3A-202ENST00000374837 KCNAB2Q13303 367 aa19.81■□□□□ 0.76
MAP1LC3A-202ENST00000374837 RUNX2Q13950 521 aa19.81■□□□□ 0.76
MAP1LC3A-202ENST00000374837 FAAH2Q6GMR7 532 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms