RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 UBIAD1Q9Y5Z9 338 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 AFDNP55196 1824 aaKnown RBP9.9□□□□□ -0.82
CD28-202ENST00000374481 ENTPD3O75355 529 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 RAB36O95755 333 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 MEOX2P50222 304 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 CAPSQ13938 189 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 ARL9Q6T311 187 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 LHFPL3Q86UP9 236 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 ZFP82Q8N141 532 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 USP7Q93009 1102 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 PKMYT1Q99640 499 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 NTPCRQ9BSD7 190 aaKnown RBP9.9□□□□□ -0.82
CD28-202ENST00000374481 SPATA5L1Q9BVQ7 753 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 OR10A4Q9H209 315 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 EMC7Q9NPA0 242 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 SCUBE2Q9NQ36 999 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 PRDM9Q9NQV7 894 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 ASF1BQ9NVP2 202 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 SMPD4Q9NXE4 827 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 BCL9O00512 1426 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 HMX2A2RU54 273 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 SLC16A6O15403 523 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 HBP1O60381 514 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 RPP40O75818 363 aaKnown RBP9.9□□□□□ -0.82
CD28-202ENST00000374481 GRK4P32298 578 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 TNFRSF17Q02223 184 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 POU4F2Q12837 409 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 TAF13Q15543 124 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 KIAA1161Q6NSJ0 714 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 TMEM81Q6P7N7 255 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 PGAP1Q75T13 922 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 DPP9Q86TI2 863 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 CSGALNACT1Q8TDX6 532 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 GGHQ92820 318 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 TANKQ92844 425 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 MED8Q96G25 268 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 AMBRA1Q9C0C7 1298 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 RNF167Q9H6Y7 350 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 SYNDIG1Q9H7V2 258 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 TMEM39AQ9NV64 488 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 USP22Q9UPT9 525 aa9.9□□□□□ -0.82
CD28-202ENST00000374481 TTC24A2A3L6 582 aaPredicted RBP9.9□□□□□ -0.83
CD28-202ENST00000374481 LCHNA4D1U4 455 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 RFXAPO00287 272 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 DPYSL4O14531 572 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 RPS6KA4O75676 772 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 GLULP15104 373 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 ARSAP15289 507 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 CTBSQ01459 385 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 SRSF11Q05519 484 aaKnown RBP9.9□□□□□ -0.83
CD28-202ENST00000374481 AIMP2Q13155 320 aaKnown RBP9.9□□□□□ -0.83
CD28-202ENST00000374481 RCAN2Q14206 197 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 LRRC37A5PQ49AS3 106 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 TOR1AIP1Q5JTV8 583 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 OR4F3Q6IEY1 312 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 SLC16A12Q6ZSM3 486 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 FOXRED2Q8IWF2 684 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 CRYBG2Q8N1P7 616 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 ZNF384Q8TF68 577 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 RHBDF1Q96CC6 855 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 REPS1Q96D71 796 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 FAM193BQ96PV7 902 aaPredicted RBP9.9□□□□□ -0.83
CD28-202ENST00000374481 ZNF607Q96SK3 696 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 THAP7Q9BT49 309 aaPredicted RBP9.9□□□□□ -0.83
CD28-202ENST00000374481 NKX6-2Q9C056 277 aaPredicted RBP9.9□□□□□ -0.83
CD28-202ENST00000374481 MROH8Q9H579 483 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 ASH2LQ9UBL3 628 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 MAP4K5Q9Y4K4 846 aa9.9□□□□□ -0.83
CD28-202ENST00000374481 GOLGA4Q13439 2230 aaKnown RBP9.89□□□□□ -0.83
CD28-202ENST00000374481 OR51F1A6NGY5 319 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 B4GALT4O60513 344 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 PFKLP17858 780 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 CLCN4P51793 760 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 CTBP2P56545 445 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 CRYZQ08257 329 aaKnown RBP9.89□□□□□ -0.83
CD28-202ENST00000374481 GPR17Q13304 367 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 CRB2Q5IJ48 1285 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 NOMO2Q5JPE7 1267 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 CLLU1Q5K131 121 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 C1orf189Q5VU69 101 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 SLC22A10Q63ZE4 541 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 RETSATQ6NUM9 610 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 MSANTD1Q6ZTZ1 278 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 ADCK2Q7Z695 626 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 VTCN1Q7Z7D3 282 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 CPA6Q8N4T0 437 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 B3GNT7Q8NFL0 401 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 YIPF6Q96EC8 236 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 FCRL1Q96LA6 429 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 SFXN2Q96NB2 322 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 FIZ1Q96SL8 496 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 MFFQ9GZY8 342 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 TRPV4Q9HBA0 871 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 KCTD5Q9NXV2 234 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 SEC14L3Q9UDX4 400 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 LOC285095A0A1B0GVY8 99 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 CDC7O00311 574 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 ARHGAP33O14559 1287 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 BET1O15155 118 aa9.89□□□□□ -0.83
CD28-202ENST00000374481 SIX6O95475 246 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms