RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 RNASET2O00584 256 aaKnown RBP15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 PPM1DO15297 605 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 KELP23276 732 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 STT3AP46977 705 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 C21orf58P58505 322 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 ISL1P61371 349 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 IRF4Q15306 451 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 SLC5A12Q1EHB4 618 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 ERICH5Q6P6B1 374 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 DCUN1D3Q8IWE4 304 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 ZC3H7AQ8IWR0 971 aaKnown RBP15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 ATG16L2Q8NAA4 619 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 NFKBIDQ8NI38 313 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 STARD8Q92502 1023 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 UCN3Q969E3 161 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 WDR34Q96EX3 536 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 ASPSCR1Q9BZE9 553 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 RUBCNLQ9H714 662 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 TM9SF3Q9HD45 589 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 PAK1IP1Q9NWT1 392 aaPredicted RBP15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 GDE1Q9NZC3 331 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 TESMINQ9Y4I5 508 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 KNL1Q8NG31 2342 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 BRWD1Q9NSI6 2320 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 A0A1W2PPW3 197 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 TMEM229AB2RXF0 380 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 PLPP1O14494 284 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 SUV39H1O43463 412 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 SEMG1P04279 462 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 POU2F2P09086 479 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 FUT4P22083 530 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 CHI3L1P36222 383 aaPredicted RBP15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 MYBPC3Q14896 1274 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 FAM71E1Q6IPT2 247 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 ADAMTSL4Q6UY14 1074 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 Q6ZPB1 254 aaPredicted RBP15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 C17orf64Q86WR6 236 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 METTL4Q8N3J2 472 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 SMYD1Q8NB12 490 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 MIEF1Q9NQG6 463 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 IMP3Q9NV31 184 aaKnown RBP15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 TMEM184CQ9NVA4 438 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 THUMPD1Q9NXG2 353 aaKnown RBP15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 KIF17Q9P2E2 1029 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 ATP6V1HQ9UI12 483 aa15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 ZFR2Q9UPR6 939 aaKnown RBP15.3■□□□□ 0.04
CNKSR1-202ENST00000374253 H3BMQ9 156 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 IL1RNP18510 177 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 TPP2P29144 1249 aaPredicted RBP15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 CLK3P49761 638 aaKnown RBP15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 RAD23AP54725 363 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 KCNJ10P78508 379 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 SMN1Q16637 294 aaKnown RBP15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 FGD3Q5JSP0 725 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 ZNF691Q5VV52 312 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 BROXQ5VW32 411 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 XAF1Q6GPH4 301 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 LAIR1Q6GTX8 287 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 UNC5DQ6UXZ4 953 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 CAMKMTQ7Z624 323 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 FAM129CQ86XR2 697 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 ERI1Q8IV48 349 aaKnown RBP15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 PIK3C3Q8NEB9 887 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 OR5K2Q8NHB8 316 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 JPH3Q8WXH2 748 aaPredicted RBP15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 COG8Q96MW5 612 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 BHLHE41Q9C0J9 482 aaPredicted RBP15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 LHPPQ9H008 270 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 NKX2-4Q9H2Z4 354 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 WDR26Q9H7D7 661 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 ZNF282Q9UDV7 671 aaPredicted RBP15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 SNX11Q9Y5W9 270 aa15.29■□□□□ 0.04
CNKSR1-202ENST00000374253 OR52A4PA6NMU1 304 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 WASHC1A8K0Z3 465 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 CDK4P11802 303 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 RRM2P31350 389 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 PTGER1P34995 402 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 PRIM2P49643 509 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 ARHGDIAP52565 204 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 FCHO2Q0JRZ9 810 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 FAM46CQ5VWP2 391 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 METRNLQ641Q3 311 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 WASH2PQ6VEQ5 465 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 SLC44A2Q8IWA5 706 aaPredicted RBP15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 ADGRF3Q8IZF5 1079 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 LINC01555Q8NAE3 123 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 C11orf65Q8NCR3 313 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 METTL2AQ96IZ6 378 aaKnown RBP15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 C12orf66Q96MD2 445 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 RDH12Q96NR8 316 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 FERD3LQ96RJ6 166 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 MKRN2Q9H000 416 aaKnown RBP15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 REEP1Q9H902 201 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 RASSF1Q9NS23 344 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 TAAR2Q9P1P5 351 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 CDH7Q9ULB5 785 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 VCANP13611 3396 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 A0A1W2PRB8 838 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 ANKDD1BA6NHY2 528 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms