RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 KDELR3O43731 214 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 GPR32O75388 356 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 RPS3AP61247 264 aaKnown RBP13.86□□□□□ -0.19
TRAF1-201ENST00000373887 ZNF267Q14586 743 aaPredicted RBP13.86□□□□□ -0.19
TRAF1-201ENST00000373887 SLC44A3Q8N4M1 653 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 ZNF709Q8N972 641 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 MFSD2AQ8NA29 543 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 SLC7A4O43246 635 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 CDC123O75794 336 aaPredicted RBP13.85□□□□□ -0.19
TRAF1-201ENST00000373887 BEST1O76090 585 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 BCKDHAP12694 445 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 RNF144AP50876 292 aaPredicted RBP13.85□□□□□ -0.19
TRAF1-201ENST00000373887 RAB8AP61006 207 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 BTBD16Q32M84 506 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 OR4F3Q6IEY1 312 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 RIT1Q92963 219 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 MKLN1Q9UL63 735 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 A0A1W2PPL8 197 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 TVP23AA6NH52 213 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 HAS3O00219 553 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 DIRAS1O95057 198 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 DNAJA1P31689 397 aaKnown RBP13.85□□□□□ -0.19
TRAF1-201ENST00000373887 SLC18A2Q05940 514 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 DAG1Q14118 895 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 NKAPLQ5M9Q1 402 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 NOXRED1Q6NXP6 359 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 DNAJA3Q96EY1 480 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 TMEM41AQ96HV5 264 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 NANSQ9NR45 359 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 SIX4Q9UIU6 781 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 OAZ3Q9UMX2 235 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 FAM170BA6NMN3 283 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 JUNP05412 331 aaKnown RBP13.85□□□□□ -0.19
TRAF1-201ENST00000373887 GNRHRP30968 328 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 GDF5P43026 501 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 NTHL1P78549 312 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 TMEM198Q66K66 360 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 SLC30A8Q8IWU4 369 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 NINJ1Q92982 152 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 TMBIM1Q969X1 311 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 FBXL8Q96CD0 374 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 CDKN2AIPNLQ96HQ2 116 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 SPATA7Q9P0W8 599 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 RPH3AQ9Y2J0 694 aaPredicted RBP13.85□□□□□ -0.19
TRAF1-201ENST00000373887 XPNPEP2O43895 674 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 GLP1RP43220 463 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 GRIK2Q13002 908 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 SERINC5Q86VE9 423 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 OR4K17Q8NGC6 315 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 SPHK2Q9NRA0 654 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 HTR3EA5X5Y0 456 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 DISC1C4P0D8 188 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 VILLO15195 856 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 ALG10BQ5I7T1 473 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 SMYD5Q6GMV2 418 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 MBOAT1Q6ZNC8 495 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 TMEM110Q86TL2 294 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 AQP11Q8NBQ7 271 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 DNAAF1Q8NEP3 725 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 ORAI3Q9BRQ5 295 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 RAB11FIP5Q9BXF6 653 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 PRDM4Q9UKN5 801 aa13.85□□□□□ -0.19
TRAF1-201ENST00000373887 K7EPI3 171 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 SDC3O75056 442 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 TMEM63AO94886 807 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 ADH1BP00325 375 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 KLK3P07288 261 aaPredicted RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 SFTPBP07988 381 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 TUBA4AP68366 448 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 E2F1Q01094 437 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 MEF2AQ02078 507 aaPredicted RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 MFSD5Q6N075 450 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 CRTC1Q6UUV9 634 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 TMEM156Q8N614 296 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 DTX3Q8N9I9 347 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 FAM124BQ9H5Z6 455 aaPredicted RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 UTS2RQ9UKP6 389 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 ANKRD66B4E2M5 251 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 CKMT2P17540 419 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 ETV3P41162 512 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 HCAR3P49019 387 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 OGDHQ02218 1023 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 MAB21L1Q13394 359 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 C3orf33Q6P1S2 294 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 SLC9B2Q86UD5 537 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 SLC15A3Q8IY34 581 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 NTAN1Q96AB6 310 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 NPLQ9BXD5 320 aaPredicted RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 TRIM36Q9NQ86 728 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 KCND1Q9NSA2 647 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 ONECUT3O60422 494 aaPredicted RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 ANXA8P13928 327 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 LCN1P31025 176 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 ADH7P40394 386 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 SLC26A5P58743 744 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 EIF5AL1Q6IS14 154 aaKnown RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 GRHL2Q6ISB3 625 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 OR10A4Q9H209 315 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 SDHAF3Q9NRP4 125 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 TEX13CA0A0J9YWL9 993 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms