RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SNAP29O95721 258 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 ZNF682O95780 498 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 EML2O95834 649 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 ASGR2P07307 311 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 HOXB6P17509 224 aaKnown RBP18.71■□□□□ 0.59
HDAC1-201ENST00000373548 MYF6P23409 242 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 MVDP53602 400 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 VAC14Q08AM6 782 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 TCEA2Q15560 299 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 CYBRD1Q53TN4 286 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 FKBP9P1Q75LS8 142 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 STK32CQ86UX6 486 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 ZCCHC7Q8N3Z6 543 aaKnown RBP18.71■□□□□ 0.59
HDAC1-201ENST00000373548 CYGBQ8WWM9 190 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 WDR92Q96MX6 357 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 TAAR2Q9P1P5 351 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 CAPN5O15484 640 aaPredicted RBP18.71■□□□□ 0.59
HDAC1-201ENST00000373548 CD72P21854 359 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 HNRNPA2B1P22626 353 aaKnown RBP18.71■□□□□ 0.59
HDAC1-201ENST00000373548 AK4P27144 223 aaPredicted RBP18.71■□□□□ 0.59
HDAC1-201ENST00000373548 MAGEA2P43356 314 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 ALDH3A2P51648 485 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 MAPK12P53778 367 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 DAG1Q14118 895 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 VEZF1Q14119 521 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 FBXO43Q4G163 708 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 NAGSQ8N159 534 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 DHRSXQ8N5I4 330 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 TRIM4Q9C037 500 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 SLC6A16Q9GZN6 736 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 FAM192AQ9GZU8 254 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 SLC6A20Q9NP91 592 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 MIEF1Q9NQG6 463 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 GPATCH2Q9NW75 528 aa18.71■□□□□ 0.59
HDAC1-201ENST00000373548 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.71■□□□□ 0.59
HDAC1-201ENST00000373548 G3V2T6 193 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 NDUFS4O43181 175 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 ALPLP05186 524 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 PEBP1P30086 187 aaKnown RBP18.7■□□□□ 0.58
HDAC1-201ENST00000373548 CAPGP40121 348 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 APOFQ13790 326 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 LIN52Q52LA3 116 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 ABRAXAS1Q6UWZ7 409 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 PAGE2Q7Z2X7 111 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 RD3Q7Z3Z2 195 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 UBE3DQ7Z6J8 389 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 ZDHHC13Q8IUH4 622 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.7■□□□□ 0.58
HDAC1-201ENST00000373548 CREB3L4Q8TEY5 395 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 TSACCQ96A04 125 aaPredicted RBP18.7■□□□□ 0.58
HDAC1-201ENST00000373548 TM4SF18Q96CE8 201 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 FBXL20Q96IG2 436 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 SLC35A5Q9BS91 424 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 MRPS26Q9BYN8 205 aaKnown RBP18.7■□□□□ 0.58
HDAC1-201ENST00000373548 MRPS30Q9NP92 439 aaKnown RBP18.7■□□□□ 0.58
HDAC1-201ENST00000373548 PNMA8BQ9ULN7 279 aaPredicted RBP18.7■□□□□ 0.58
HDAC1-201ENST00000373548 TRBC2A0A5B9 178 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 LRRC72A6NJI9 287 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 GNGT2O14610 69 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 H6PDO95479 791 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 SPIDRQ14159 915 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 COX20Q5RI15 118 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 ZDHHC21Q8IVQ6 265 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 ADHFE1Q8IWW8 467 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 CCL4L1Q8NHW4 92 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 JPH3Q8WXH2 748 aaPredicted RBP18.7■□□□□ 0.58
HDAC1-201ENST00000373548 FAM3CQ92520 227 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 MAL2Q969L2 176 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 TRAPPC9Q96Q05 1148 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 SOX17Q9H6I2 414 aaPredicted RBP18.7■□□□□ 0.58
HDAC1-201ENST00000373548 KIR3DX1Q9H7L2 352 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 CD320Q9NPF0 282 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 SPHK1Q9NYA1 384 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 TAS2R9Q9NYW1 312 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 RPS6KA6Q9UK32 745 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 HEBP2Q9Y5Z4 205 aa18.7■□□□□ 0.58
HDAC1-201ENST00000373548 A0A1W2PRB8 838 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 H3BNH8 94 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 CLEC3AO75596 197 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 APBB3O95704 486 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 CLIC3O95833 236 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 CLPTM1O96005 669 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 TFAP2AP05549 437 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 POU3F3P20264 500 aaPredicted RBP18.69■□□□□ 0.58
HDAC1-201ENST00000373548 DDCP20711 480 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 ADARB1P78563 741 aaKnown RBP18.69■□□□□ 0.58
HDAC1-201ENST00000373548 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.69■□□□□ 0.58
HDAC1-201ENST00000373548 CBLL1Q75N03 491 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 TMEM179BQ7Z7N9 219 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 HS3ST5Q8IZT8 346 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 SVOPLQ8N434 492 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 HMGB4Q8WW32 186 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 RGMAQ96B86 450 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 AICDAQ9GZX7 198 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 EBF1Q9UH73 591 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 ACSL6Q9UKU0 697 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 PADI4Q9UM07 663 aa18.69■□□□□ 0.58
HDAC1-201ENST00000373548 SEMG1P04279 462 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 GLULP15104 373 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 HTR1BP28222 390 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms