RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 LRP5LA4QPB2 252 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 GTPBP1O00178 669 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 PHYHO14832 338 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 HSD17B2P37059 387 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ATP4BP51164 291 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 HCCSP53701 268 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 GRB10Q13322 594 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 PRPF38BQ5VTL8 546 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 LRRC55Q6ZSA7 311 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 PRRT1Q99946 306 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 MOCS1Q9NZB8 636 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 YY2O15391 372 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 RENP00797 406 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ANTXR2P58335 489 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 PPIGQ13427 754 aaKnown RBP eCLIP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 SIGIRRQ6IA17 410 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 TSPYL5Q86VY4 417 aaPredicted RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 MCEMP1Q8IX19 187 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 CMIPQ8IY22 773 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 FLAD1Q8NFF5 587 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 FBXL20Q96IG2 436 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 NARFQ9UHQ1 456 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 WASF3Q9UPY6 502 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 KIAA0355O15063 1070 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 FAM86B2P0C5J1 330 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 RAB31Q13636 194 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 DALRD3Q5D0E6 543 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 KLHDC1Q8N7A1 406 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 MROQ9BYG7 248 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 PIH1D1Q9NWS0 290 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 GVINP1Q7Z2Y8 2422 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 SLC1A7O00341 560 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 CMPK1P30085 196 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 CHIT1Q13231 466 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 TRMT10BQ6PF06 316 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ZC3H14Q6PJT7 736 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 AKR7LQ8NHP1 331 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 MS4A12Q9NXJ0 267 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ERVW-1Q9UQF0 538 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 DOCK7Q96N67 2140 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ANKUB1A6NFN9 424 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 H3BRB1 525 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 LILRB5O75023 590 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 SPTAN1Q13813 2472 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 CHRFAM7AQ494W8 412 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 CARD16Q5EG05 197 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 C19orf35Q6ZS72 473 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 SV2AQ7L0J3 742 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 BSCL2Q96G97 398 aaPredicted RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 TGM7Q96PF1 710 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ZNF226Q9NYT6 803 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 KLHL9Q9P2J3 617 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ZNF490Q9ULM2 529 aaPredicted RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 MED31Q9Y3C7 131 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 COL15A1P39059 1388 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 TLX3O43711 291 aaPredicted RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 PRPS1L1P21108 318 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 AQP1P29972 269 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 RPS3AP61247 264 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 SEMA5AQ13591 1074 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 FIP1L1Q6UN15 594 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 CPT1BQ92523 772 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 POP1Q99575 1024 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 CDT1Q9H211 546 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 PRDM12Q9H4Q4 367 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 OXSMQ9NWU1 459 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 TXNL4BQ9NX01 149 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ERVK13-1Q9NX77 482 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 PCTPQ9UKL6 214 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 CA5AP35218 305 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 HMGCS2P54868 508 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 SNRPD2P62316 118 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 MGAT5BQ3V5L5 792 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 FSTL4Q6MZW2 842 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 INTS5Q6P9B9 1019 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 OR8J3Q8NGG0 315 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 OR6K6Q8NGW6 343 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ST8SIA4Q92187 359 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 PINK1Q9BXM7 581 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 NKX6-2Q9C056 277 aaPredicted RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ZDHHC5Q9C0B5 715 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ESRP2Q9H6T0 727 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 TMEM181Q9P2C4 612 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 SALL1Q9NSC2 1324 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 TMEM94Q12767 1356 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 TNS3Q68CZ2 1445 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 ADIGQ0VDE8 80 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 GPR68Q15743 365 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 VAMP3Q15836 100 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 IQCJQ1A5X6 159 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 GSX2Q9BZM3 304 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 QTRT2Q9H974 415 aaKnown RBP6.82□□□□□ -1.32
CSMD2-206ENST00000373388 PTCH2Q9Y6C5 1203 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 MIA3Q5JRA6 1907 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 H7C4K7 107 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 SCN2BO60939 215 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 IGSF6O95976 241 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 FOXN2P32314 431 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 DDOSTP39656 456 aa6.82□□□□□ -1.32
CSMD2-206ENST00000373388 MEF2DQ14814 521 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms