RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 MID1O15344 667 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 TNFRSF21O75509 655 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 PCDH8O95206 1070 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 TAS2R38P59533 333 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 GTF2IRD2BQ6EKJ0 949 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 LAIR1Q6GTX8 287 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 TSEN54Q7Z6J9 526 aaKnown RBP17.94■□□□□ 0.46
USP49-202ENST00000373010 GTF2IRD2Q86UP8 949 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 LRRTM4Q86VH4 590 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.94■□□□□ 0.46
USP49-202ENST00000373010 TTC29Q8NA56 475 aaPredicted RBP17.94■□□□□ 0.46
USP49-202ENST00000373010 ATG16L2Q8NAA4 619 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 DTNBP1Q96EV8 351 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 CNDP2Q96KP4 475 aaKnown RBP17.94■□□□□ 0.46
USP49-202ENST00000373010 DOHHQ9BU89 302 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 SFXN1Q9H9B4 322 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 CUEDC1Q9NWM3 386 aaPredicted RBP17.94■□□□□ 0.46
USP49-202ENST00000373010 MAP4K5Q9Y4K4 846 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 REV3LO60673 3130 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 KAT7O95251 611 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 ANGPTL1O95841 491 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 PSMB5P28074 263 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 PLA2G16P53816 162 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 PHEXP78562 749 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 LRRC74AQ0VAA2 488 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 DCTN2Q13561 401 aaKnown RBP17.93■□□□□ 0.46
USP49-202ENST00000373010 DUS1LQ6P1R4 473 aaKnown RBP17.93■□□□□ 0.46
USP49-202ENST00000373010 DHRS4L2Q6PKH6 230 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.93■□□□□ 0.46
USP49-202ENST00000373010 OR52N2Q8NGI0 321 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 NFKBIDQ8NI38 313 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 SPPL2AQ8TCT8 520 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 RAB7BQ96AH8 199 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 CHFRQ96EP1 664 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 DGCR6LQ9BY27 220 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 CCDC90BQ9GZT6 254 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 KRT84Q9NSB2 600 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 GMPPBQ9Y5P6 360 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 RTCAO00442 366 aaKnown RBP17.93■□□□□ 0.46
USP49-202ENST00000373010 NOL3O60936 208 aaKnown RBP17.93■□□□□ 0.46
USP49-202ENST00000373010 PTX3P26022 381 aaPredicted RBP17.93■□□□□ 0.46
USP49-202ENST00000373010 RUNX3Q13761 415 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 TEAD4Q15561 434 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 DUSP6Q16828 381 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 GCNT6Q5T4J0 391 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 B3GNT8Q7Z7M8 397 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 RNF130Q86XS8 419 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 KRT78Q8N1N4 520 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 UBE2E3Q969T4 207 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 NRBF2Q96F24 287 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 NODALQ96S42 347 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 PLA2G2FQ9BZM2 168 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 RUBCNLQ9H714 662 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 MBNL1Q9NR56 388 aaKnown RBP17.93■□□□□ 0.46
USP49-202ENST00000373010 ZNF451Q9Y4E5 1061 aa17.93■□□□□ 0.46
USP49-202ENST00000373010 JRKO75564 520 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 TBX6O95947 436 aaPredicted RBP17.92■□□□□ 0.46
USP49-202ENST00000373010 TPP2P29144 1249 aaPredicted RBP17.92■□□□□ 0.46
USP49-202ENST00000373010 RRM2P31350 389 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 SOAT1P35610 550 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 EMP3P54852 163 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 RPA4Q13156 261 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 SCARB2Q14108 478 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 CYP2A13Q16696 494 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 SLC5A12Q1EHB4 618 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 SLC9B2Q86UD5 537 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 C17orf64Q86WR6 236 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 SETD9Q8NE22 299 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 SLC6A16Q9GZN6 736 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 MTIF3Q9H2K0 278 aaKnown RBP17.92■□□□□ 0.46
USP49-202ENST00000373010 TMEM9Q9P0T7 183 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 SERGEFQ9UGK8 458 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 TESMINQ9Y4I5 508 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 OR1A2Q9Y585 309 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 SNX5Q9Y5X3 404 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 ATG2BQ96BY7 2078 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 A0A1W2PRB8 838 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 TRIM64BA6NI03 449 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 C9P02748 559 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 CHI3L1P36222 383 aaPredicted RBP17.92■□□□□ 0.46
USP49-202ENST00000373010 ENTPD1P49961 510 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 TMBIM6P55061 237 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 SELENOWP63302 87 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 TUBA3CQ13748 450 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 CYP27C1Q4G0S4 372 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 AGBL4Q5VU57 503 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 ANKRD53Q8N9V6 530 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 OR5K2Q8NHB8 316 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 TAMM41Q96BW9 452 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 CSF3RQ99062 836 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 IGFLR1Q9H665 355 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 C1GALT1Q9NS00 363 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 TAS2R9Q9NYW1 312 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 TAAR2Q9P1P5 351 aa17.92■□□□□ 0.46
USP49-202ENST00000373010 RPL3P39023 403 aaKnown RBP17.91■□□□□ 0.46
USP49-202ENST00000373010 OR1E2P47887 323 aa17.91■□□□□ 0.46
USP49-202ENST00000373010 PRIM2P49643 509 aa17.91■□□□□ 0.46
USP49-202ENST00000373010 KEAP1Q14145 624 aa17.91■□□□□ 0.46
USP49-202ENST00000373010 C9orf50Q5SZB4 431 aa17.91■□□□□ 0.46
USP49-202ENST00000373010 METRNLQ641Q3 311 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms