RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 C6orf163Q5TEZ5 329 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 LYPLAL1Q5VWZ2 237 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 FAM122CQ6P4D5 195 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 ZDHHC24Q6UX98 284 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 SPATA24Q86W54 205 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 IFNEQ86WN2 208 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 CSNK1A1LQ8N752 337 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 TEX19Q8NA77 164 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 LPGAT1Q92604 370 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 GATA6Q92908 595 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 CNTNAP3BQ96NU0 1288 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 TUBA1CQ9BQE3 449 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 CNTNAP3Q9BZ76 1288 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 NEK6Q9HC98 313 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 SLAMF7Q9NQ25 335 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 MIEF1Q9NQG6 463 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 CNOT6Q9ULM6 557 aaKnown RBP6.74□□□□□ -1.33
USP1-202ENST00000371146 KIAA1671Q9BY89 1806 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 ANAPC1Q9H1A4 1944 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 LOC105369274A0A096LPK9 316 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 LOC102723532A0A0G2JNH3 316 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 LOC100653049A0A140TA62 436 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 OR6C65A6NJZ3 312 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 NKX2-8O15522 239 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 DFNA5O60443 496 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 TCEA3O75764 348 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 DNAJB5O75953 348 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 KRT34O76011 436 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 STK17BO94768 372 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 ZBTB11O95625 1053 aaPredicted RBP6.74□□□□□ -1.33
USP1-202ENST00000371146 RAC2P15153 192 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 BGNP21810 368 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 SHMT2P34897 504 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 PTDSS1P48651 473 aaKnown RBP6.74□□□□□ -1.33
USP1-202ENST00000371146 FBXW4P57775 412 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 RAC1P63000 192 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 STX5Q13190 355 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 NSDHLQ15738 373 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 ISXQ2M1V0 245 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 HKDC1Q2TB90 917 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 HMGN2P46Q86SG4 172 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 ADAMTSL2Q86TH1 951 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 THOC6Q86W42 341 aaKnown RBP6.74□□□□□ -1.33
USP1-202ENST00000371146 MCATQ8IVS2 390 aaKnown RBP6.74□□□□□ -1.33
USP1-202ENST00000371146 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP1-202ENST00000371146 OR4N4Q8N0Y3 316 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 OR5T3Q8NGG3 340 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 OR8K5Q8NH50 307 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 ZNF480Q8WV37 535 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 SMPDL3BQ92485 455 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 RBM18Q96H35 190 aaKnown RBP6.74□□□□□ -1.33
USP1-202ENST00000371146 YIPF4Q9BSR8 244 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 MRPL1Q9BYD6 325 aaKnown RBP6.74□□□□□ -1.33
USP1-202ENST00000371146 TWSG1Q9GZX9 223 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 EHD1Q9H4M9 534 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 CNOT10Q9H9A5 744 aaKnown RBP6.74□□□□□ -1.33
USP1-202ENST00000371146 ANKHQ9HCJ1 492 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 NLGN3Q9NZ94 848 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 SLC17A7Q9P2U7 560 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 GRID1Q9ULK0 1009 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 PDE10AQ9Y233 779 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 TEX264Q9Y6I9 313 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.74□□□□□ -1.33
USP1-202ENST00000371146 USF3Q68DE3 2245 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 SMIM31A0A1B0GVY4 71 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 SH3PXD2BA1X283 911 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 B8ZZF3 427 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 CTSBP07858 339 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 CEACAM1P13688 526 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 NQO1P15559 274 aaKnown RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 UGT2B7P16662 529 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 MDH1P40925 334 aaKnown RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 DPP6P42658 865 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 SUOXP51687 545 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 PNLIPRP1P54315 467 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 RGS1Q08116 209 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 ACSM2AQ08AH3 577 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 CTSL3PQ5NE16 218 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 ACSM2BQ68CK6 577 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 ADNP2Q6IQ32 1131 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 ZNF549Q6P9A3 640 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 ADAMTSL4Q6UY14 1074 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 CPSF7Q8N684 471 aaKnown RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 ADCY4Q8NFM4 1077 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 AIF1LQ9BQI0 150 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 TEX101Q9BY14 249 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 FAM60AQ9NP50 221 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 WASH6PQ9NQA3 447 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 DNAJC11Q9NVH1 559 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 INTS7Q9NVH2 962 aaKnown RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 TMEM5Q9Y2B1 443 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 TMEM120BA0PK00 339 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 CCT8L1PA6NM43 557 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 WASHC1A8K0Z3 465 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 BRINP1O60477 761 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 KLHL2O95198 593 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 HEXBP07686 556 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 CHRM5P08912 532 aaPredicted RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 NR1D1P20393 614 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 NT5EP21589 574 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms