RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 C7orf69Q9H7B7 122 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 RMI1Q9H9A7 625 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TNFRSF12AQ9NP84 129 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 ARL8BQ9NVJ2 186 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 ANKMY1Q9P2S6 941 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 CPNE7Q9UBL6 633 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 ANGPTL3Q9Y5C1 460 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 HEMK1Q9Y5R4 338 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 DNAJC15Q9Y5T4 150 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 CAPN7Q9Y6W3 813 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 DOCK9Q9BZ29 2069 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 TCRBV5S2A0A599 114 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 TCRBV21S2A2A0A5A6 115 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 CLGNO14967 610 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 KMOO15229 486 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 TAPBPO15533 448 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 PAK4O96013 591 aaPredicted RBP8.43□□□□□ -1.06
TPM3-213ENST00000368545 SFTPCP11686 197 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 PTPN4P29074 926 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 SLC7A1P30825 629 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 ALDH9A1P49189 494 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 MVKQ03426 396 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 KIR3DS1Q14943 382 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 FBXO48Q5FWF7 155 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 KIAA1324Q6UXG2 1013 aaKnown RBP8.43□□□□□ -1.06
TPM3-213ENST00000368545 RNF165Q6ZSG1 346 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 SYVN1Q86TM6 617 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 TRIM69Q86WT6 500 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 ZNF547Q8IVP9 402 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 CPSF7Q8N684 471 aaKnown RBP8.43□□□□□ -1.06
TPM3-213ENST00000368545 TEX9Q8N6V9 391 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 ATG16L2Q8NAA4 619 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 ATP6V1E2Q96A05 226 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 FBXL8Q96CD0 374 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 MED8Q96G25 268 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 PPP1R36Q96LQ0 422 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 RAB3IPQ96QF0 476 aaPredicted RBP8.43□□□□□ -1.06
TPM3-213ENST00000368545 DMRTA2Q96SC8 542 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 SLC6A17Q9H1V8 727 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 NOL11Q9H8H0 719 aaKnown RBP8.43□□□□□ -1.06
TPM3-213ENST00000368545 IL17BQ9UHF5 180 aa8.43□□□□□ -1.06
TPM3-213ENST00000368545 A0A1W2PPC4 97 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 LRRC72A6NJI9 287 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 MYO1CO00159 1063 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 PPP6CO00743 305 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 POP7O75817 140 aaKnown RBP8.42□□□□□ -1.06
TPM3-213ENST00000368545 EBLN1P0CF75 366 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 GABRG2P18507 467 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 THBS2P35442 1172 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 ARL1P40616 181 aaPredicted RBP8.42□□□□□ -1.06
TPM3-213ENST00000368545 SLC6A12P48065 614 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 DGKEP52429 567 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 MGAT2Q10469 447 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 TCEAL6Q6IPX3 200 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 UNC5DQ6UXZ4 953 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 AMZ2Q86W34 360 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 TRIM48Q8IWZ4 208 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 CFAP206Q8IYR0 622 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 OR2T34Q8NGX1 318 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 MAGEC3Q8TD91 643 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 TCEAL3Q969E4 200 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 ESAMQ96AP7 390 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 SLC7A6OSQ96CW6 309 aaPredicted RBP8.42□□□□□ -1.06
TPM3-213ENST00000368545 NTMT1Q9BV86 223 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 SORBS1Q9BX66 1292 aaKnown RBP8.42□□□□□ -1.06
TPM3-213ENST00000368545 ZNF385DQ9H6B1 395 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 SGK2Q9HBY8 427 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 MBNL1Q9NR56 388 aaKnown RBP8.42□□□□□ -1.06
TPM3-213ENST00000368545 KLC4Q9NSK0 619 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.42□□□□□ -1.06
TPM3-213ENST00000368545 TRPS1Q9UHF7 1281 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 ARHGEF33A8MVX0 844 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 CACNB4O00305 520 aaPredicted RBP8.42□□□□□ -1.06
TPM3-213ENST00000368545 OR7A17O14581 309 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 PIP5K1BO14986 540 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 UBDO15205 165 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 KCNJ13O60928 360 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 OR4F21O95013 312 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 F13BP05160 661 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 HOXC4P09017 264 aaPredicted RBP8.42□□□□□ -1.06
TPM3-213ENST00000368545 HGFP14210 728 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 EZRP15311 586 aaKnown RBP8.42□□□□□ -1.06
TPM3-213ENST00000368545 EIF2S3P41091 472 aaKnown RBP8.42□□□□□ -1.06
TPM3-213ENST00000368545 ATP4BP51164 291 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 TPMTP51580 245 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 FOXA1P55317 472 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 TRAF3Q13114 568 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 SQLEQ14534 574 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 GGTA1PQ4G0N0 100 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 COLEC12Q5KU26 742 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 DOK6Q6PKX4 331 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 IL27RAQ6UWB1 636 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 MBOAT1Q6ZNC8 495 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 LARP4Q71RC2 724 aaKnown RBP eCLIP8.42□□□□□ -1.061e-8■□□□□ 9.3
TPM3-213ENST00000368545 MILR1Q7Z6M3 343 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 TMPRSS12Q86WS5 348 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 DDIASQ8IXT1 998 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 KLHDC8AQ8IYD2 350 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 OR52B6Q8NGF0 335 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 KCNA7Q96RP8 456 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms