RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 MGAT4DA6NG13 374 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 MANBAO00462 879 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 CLGNO14967 610 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 MGRN1O60291 552 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 UBXN7O94888 489 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 ATP6V1G2O95670 118 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 EBLN1P0CF75 366 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 ADSLP30566 484 aaPredicted RBP9.53□□□□□ -0.88
TPM3-210ENST00000368530 GGT5P36269 586 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 HALP42357 657 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 SEPHS1P49903 392 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 DIO3P55073 304 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 FOXM1Q08050 763 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 NAE1Q13564 534 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 ERV3-1Q14264 604 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 IL11RAQ14626 422 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 HERC3Q15034 1050 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 RPS6KA2Q15349 733 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 NR6A1Q15406 480 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 CPSF6Q16630 551 aaKnown RBP eCLIP9.53□□□□□ -0.885e-7■□□□□ 10.7
TPM3-210ENST00000368530 XKR7Q5GH72 579 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 AGTRAPQ6RW13 159 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 C11orf96Q7Z7L8 435 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 AMZ2Q86W34 360 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 RASGRP3Q8IV61 690 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 DEFB107AQ8IZN7 70 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 ARHGAP24Q8N264 748 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 RSC1A1Q92681 617 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 LINC00615Q96LM1 132 aaPredicted RBP9.53□□□□□ -0.88
TPM3-210ENST00000368530 CCDC138Q96M89 665 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 NPAS2Q99743 824 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 PFDN4Q9NQP4 134 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 STOX2Q9P2F5 926 aaPredicted RBP9.53□□□□□ -0.88
TPM3-210ENST00000368530 EPHA6Q9UF33 1036 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 TRPS1Q9UHF7 1281 aa9.53□□□□□ -0.88
TPM3-210ENST00000368530 GPR89AB7ZAQ6 455 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 NR5A2O00482 541 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 CFLARO15519 480 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 CREG1O75629 220 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 PDE5AO76074 875 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 CLDN9O95484 217 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 C1orf105O95561 183 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 SLC16A8O95907 504 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 GPR89BP0CG08 455 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 GPX3P22352 226 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 IMPA1P29218 277 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 PPM1FP49593 454 aaPredicted RBP9.52□□□□□ -0.88
TPM3-210ENST00000368530 ATP4BP51164 291 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 NOTCH2Q04721 2471 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 ART3Q13508 389 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 PCM1Q15154 2024 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 ZRSR2Q15696 482 aaKnown RBP9.52□□□□□ -0.88
TPM3-210ENST00000368530 MMEL1Q495T6 779 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.52□□□□□ -0.88
TPM3-210ENST00000368530 ATP6AP1LQ52LC2 224 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 HIST2H2BCQ6DN03 193 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 METTL2BQ6P1Q9 378 aaKnown RBP9.52□□□□□ -0.88
TPM3-210ENST00000368530 WASH2PQ6VEQ5 465 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 Q6ZSR9 355 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 ASB18Q6ZVZ8 466 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 PRSS42Q7Z5A4 293 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 SPATA19Q7Z5L4 167 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 LAPTM4BQ86VI4 370 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 THOC6Q86W42 341 aaKnown RBP9.52□□□□□ -0.88
TPM3-210ENST00000368530 APLFQ8IW19 511 aaPredicted RBP9.52□□□□□ -0.88
TPM3-210ENST00000368530 SCUBE1Q8IWY4 988 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 ULK2Q8IYT8 1036 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 MIER2Q8N344 545 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 FNDC5Q8NAU1 212 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 AVL9Q8NBF6 648 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 PHC3Q8NDX5 983 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 TGM7Q96PF1 710 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 NTMT1Q9BV86 223 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 RAB33BQ9H082 229 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 C1orf21Q9H246 121 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 DENND2DQ9H6A0 471 aaPredicted RBP9.52□□□□□ -0.88
TPM3-210ENST00000368530 PRM3Q9NNZ6 103 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 WASH6PQ9NQA3 447 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 ZNF490Q9ULM2 529 aaPredicted RBP9.52□□□□□ -0.88
TPM3-210ENST00000368530 PLAGL1Q9UM63 463 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 POLHQ9Y253 713 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 TDRKHQ9Y2W6 561 aaKnown RBP9.52□□□□□ -0.88
TPM3-210ENST00000368530 PCDHB3Q9Y5E6 796 aa9.52□□□□□ -0.88
TPM3-210ENST00000368530 CFAP20Q9Y6A4 193 aaKnown RBP9.52□□□□□ -0.88
TPM3-210ENST00000368530 A0A088AWK7 358 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 C17orf113A0A1B0GUU1 675 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 OR52A4PA6NMU1 304 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 MKRN2OSH3BPM6 223 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 KMOO15229 486 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 PRAMEF4O60810 478 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 CIB2O75838 187 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 DNAJB5O75953 348 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 SORBS2O94875 1100 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 VIPP01282 170 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 SNRPB2P08579 225 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 PRR35P0CG20 571 aa9.51□□□□□ -0.89
TPM3-210ENST00000368530 NELFEP18615 380 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 RPL10P27635 214 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 HNRNPH1P31943 449 aaKnown RBP9.51□□□□□ -0.89
TPM3-210ENST00000368530 UQCRFS1P47985 274 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms