RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OR52W1Q6IF63 320 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 KLBQ86Z14 1044 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 HS3ST5Q8IZT8 346 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 NDRG1Q92597 394 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CHODLQ9H9P2 273 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FAAHO00519 579 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TFE3P19532 575 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SKA2Q8WVK7 121 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ARMCX1Q9P291 453 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ICKQ9UPZ9 632 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 PPM1DO15297 605 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 BMP7P18075 431 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 DPYSL2Q16555 572 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM35AQ53FP2 167 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SLC39A4Q6P5W5 647 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TXLNGYQ9BZA5 131 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ULBP1Q9BZM6 244 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 PLCXD1Q9NUJ7 323 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF214Q9UL59 606 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 F5H5T6 163 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 AQP9O43315 295 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CATP04040 527 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CHRNB2P17787 502 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 NDST2P52849 883 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ART1P52961 327 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 PTPN11Q06124 597 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ESRP1Q6NXG1 681 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FAM20CQ8IXL6 584 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 APCDD1Q8J025 514 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 LGMNQ99538 433 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FAM49AQ9H0Q0 323 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SDHAF2Q9NX18 166 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 OR5H8P0DN80 308 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 BMPR1AP36894 532 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CBWD6Q4V339 395 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 STEAP4Q687X5 459 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SYTL1Q8IYJ3 562 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ACTL9Q8TC94 416 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 NELL1Q92832 810 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 DVL3Q92997 716 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 DPY30Q9C005 99 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 LRRN3E7EW58 273 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 C9P02748 559 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FABP3P05413 133 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ALAS1P13196 640 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 MAOAP21397 527 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 DEFA6Q01524 100 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 LRRN3Q9H3W5 708 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SEC61A2Q9H9S3 476 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TLX3O43711 291 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SERPIND1P05546 499 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 E2F1Q01094 437 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 IGSF11Q5DX21 431 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 REEP3Q6NUK4 255 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FAM180AQ6UWF9 173 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 WDFY2Q96P53 400 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 PREBQ9HCU5 417 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 NLGN3Q9NZ94 848 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 HSBP1L1C9JCN9 74 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 GABARAPO95166 117 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SPDEFO95238 335 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ZBTB7AO95365 584 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CLDN10P78369 228 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ABHD18Q0P651 414 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF266Q14584 549 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SLCO6A1Q86UG4 719 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 OR52E6Q96RD3 313 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 HERPUD2Q9BSE4 406 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ATF5Q9Y2D1 282 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FABP12A6NFH5 140 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ZSCAN5BA6NJL1 495 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SLC12A3P55017 1021 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 BST1Q10588 318 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 RIOX1Q9H6W3 641 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TAS2R9Q9NYW1 312 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 AGO2Q9UKV8 859 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 NOS2P35228 1153 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 OR2T5Q6IEZ7 315 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 OR2T29Q8NH02 315 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CRAMP1Q96RY5 1269 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 PRKAG3Q9UGI9 489 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 AQP8O94778 261 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FGF4P08620 206 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 RFX2P48378 723 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 USP17L10C9JJH3 530 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FKBP1BP68106 108 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 GNMTQ14749 295 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 HEPACAMQ14CZ8 416 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SLC35D2Q76EJ3 337 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ZBTB44Q8NCP5 570 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 OR4C6Q8NH72 309 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TRMT10AQ8TBZ6 339 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CMSS1Q9BQ75 279 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 A0A087WZ62 844 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 A0A1B0GTW7 788 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 I6L893 689 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CREB1P16220 341 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 BTF3P20290 206 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 OR2B6P58173 313 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms