RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 MRPS30Q9NP92 439 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 MARCH4Q9P2E8 410 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 CDRT1O95170 752 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 ANXA3P12429 323 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 ENPP6Q6UWR7 440 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 TESCQ96BS2 214 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 KLHL18O94889 574 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 IL7P13232 177 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 PCGF2P35227 344 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 RABGGTBP53611 331 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 SIX5Q8N196 739 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 GIMAP2Q9UG22 337 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 UBR3Q6ZT12 1888 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 TLX2O43763 284 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 ACVR2AP27037 513 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 CAP1Q01518 475 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 UBXN11Q5T124 520 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 RPS27LQ71UM5 84 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 PYCR2Q96C36 320 aa11.39□□□□□ -0.59
CDC42BPA-202ENST00000366764 MTMR11A4FU01 709 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 GLTPD2A6NH11 291 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 CLCA1A8K7I4 914 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 BCAS1O75363 584 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 TRIM3O75382 744 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 SNAI1O95863 264 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 PITX1P78337 314 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF155Q12901 538 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 ANKDD1AQ495B1 522 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 KRTCAP2Q8N6L1 136 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 WRAP53Q9BUR4 548 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 FBXO10Q9UK96 956 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 YIPF1Q9Y548 306 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 TDRD15B5MCY1 1934 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 F7P08709 466 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 PTGS2P35354 604 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 TSSK6Q9BXA6 273 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 RNF38Q9H0F5 515 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 HCN1O60741 890 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 UPK1BO75841 260 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 RBM34P42696 430 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 KDELC1Q6UW63 502 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 PPP1R13LQ8WUF5 828 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 CHFRQ96EP1 664 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF778Q96MU6 729 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 NFKBIL1Q9UBC1 381 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 TAF1LQ8IZX4 1826 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 NT5C1B-RDH14C9J2C7 533 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 JRKO75564 520 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 BEST1O76090 585 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 UBXN7O94888 489 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 ARSDP51689 593 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 CD47Q08722 323 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 TBRG1Q3YBR2 411 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 CLIP4Q8N3C7 705 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 PAPD5Q8NDF8 572 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 OTUB2Q96DC9 234 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 UNC13CQ8NB66 2214 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 M0QZQ0 153 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 TFAP2AP05549 437 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 CRHBPP24387 322 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 SPHARQ15513 63 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZCCHC12Q6PEW1 402 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 UNC5DQ6UXZ4 953 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 SERINC5Q86VE9 423 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR9A1PQ8NGU1 263 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 RBM18Q96H35 190 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 RHBGQ9H310 441 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 TCF7L1Q9HCS4 588 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 PDYNP01213 254 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 KCTD11Q693B1 232 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF534Q76KX8 674 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 PTRH1Q86Y79 214 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 MARCH9Q86YJ5 346 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 ERVK-18Q9QC07 812 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 DLGAP4Q9Y2H0 992 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 SPEF1Q9Y4P9 236 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 ATG2BQ96BY7 2078 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 CAPZA1P52907 286 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 CDKL1Q00532 357 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 ARL14EPQ8N8R7 260 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 INO80EQ8NBZ0 244 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 SLC37A3Q8NCC5 494 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 SLAIN1Q8ND83 568 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 MNTQ99583 582 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 RDH14Q9HBH5 336 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 HSPB11Q9Y547 144 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 SHANK3Q9BYB0 1731 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 S100A6P06703 90 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 GDF5P43026 501 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 POU4F2Q12837 409 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 CDK5R2Q13319 367 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 GAS6Q14393 721 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 RAB41Q5JT25 222 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 TSEN15Q8WW01 171 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 ABCD2Q9UBJ2 740 aa11.38□□□□□ -0.59
CDC42BPA-202ENST00000366764 CEP250Q9BV73 2442 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 BOLA2-SMG1P6H3BVE0 249 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 UBXN10Q96LJ8 280 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZFP3Q96NJ6 502 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 FKBP7Q9Y680 259 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms