RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SKP1P63208 163 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 BTG2P78543 158 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CAV1Q03135 178 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ZNF33BQ06732 778 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 RBBP5Q15291 538 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 OR4D1Q15615 310 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ADPRMQ3LIE5 342 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 C4orf17Q53FE4 359 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 FCRLBQ6BAA4 426 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 VN1R5Q7Z5H4 357 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CRLF3Q8IUI8 442 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 BEST3Q8N1M1 668 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CA13Q8N1Q1 262 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TCAIMQ8N3R3 496 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 MDS2Q8NDY4 140 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 NR4A3Q92570 626 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CDKL2Q92772 493 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 WDR34Q96EX3 536 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TSPAN17Q96FV3 270 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SEC16BQ96JE7 1060 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ZNF354BQ96LW1 612 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 C5orf34Q96MH7 638 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 LPAR4Q99677 370 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 UNKQ9C0B0 810 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PITHD1Q9GZP4 211 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.84□□□□□ -0.356e-7■■■□□ 14.9
TNFRSF1A-202ENST00000366159 EHD1Q9H4M9 534 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ABI3Q9P2A4 366 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PTBP2Q9UKA9 531 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ZNF490Q9ULM2 529 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CLDN16Q9Y5I7 305 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TCRBV16S1A1N1A0A5B0 115 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 LRIT2A6NDA9 550 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 URADA6NGE7 173 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 NCF1BA6NI72 391 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 A8MUI8 341 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 NCF1CA8MVU1 366 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CDK2AP1O14519 115 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 NCF1P14598 390 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 STMN1P16949 149 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 EPORP19235 508 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 MST1P26927 711 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 GSTM2P28161 218 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 HNRNPH1P31943 449 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 HNF4AP41235 474 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SLC12A2P55011 1212 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PLTPP55058 493 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 OR4D2P58180 307 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 RAB10P61026 200 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ATP6V0D1P61421 351 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 DLG1Q12959 904 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TUBA3CQ13748 450 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 RUNX2Q13950 521 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 KBTBD12Q3ZCT8 623 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 GRTP1Q5TC63 336 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TUBA3EQ6PEY2 450 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TMIGD1Q6UXZ0 262 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SYT10Q6XYQ8 523 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 FRA10AC1Q70Z53 315 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 MAMDC2Q7Z304 686 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 GPSM1Q86YR5 675 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 LGI4Q8N135 537 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ARMC10Q8N2F6 343 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PDPRQ8NCN5 879 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 NFAM1Q8NET5 270 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TTLQ8NG68 377 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 DNAJB8Q8NHS0 232 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 KIAA1191Q96A73 305 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 MS4A6EQ96DS6 147 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 QRFPRQ96P65 431 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SIGLEC12Q96PQ1 595 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CAPS2Q9BXY5 557 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 KCNK13Q9HB14 408 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 NECTIN3Q9NQS3 549 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 OSGIN2Q9Y236 505 aa12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 UTP11Q9Y3A2 253 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ZGRF1Q86YA3 2104 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 A1L4Q6 167 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 FAM227AF5H4B4 570 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 LRRTM2O43300 516 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PRMT3O60678 531 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 B4GALT2O60909 372 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CLEC3AO75596 197 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 FAM155BO75949 473 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 WISP2O76076 250 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 RASAL1O95294 804 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SLC35E2BP0CK96 405 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 RNH1P13489 461 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CD22P20273 847 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 MAOAP21397 527 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SPRP35270 261 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 GMPRP36959 345 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CD96P40200 585 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CASP2P42575 452 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 MAGEA4P43358 317 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ACTN3Q08043 901 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PCDH1Q08174 1060 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SLBPQ14493 270 aaKnown RBP eCLIP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms