RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 RAB33BQ9H082 229 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 OR52A5Q9H2C5 316 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 EPB41L1Q9H4G0 881 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 KIR3DX1Q9H7L2 352 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 SYNPO2LQ9H987 977 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 COG4Q9H9E3 785 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 LIN28AQ9H9Z2 209 aaKnown RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 UCK1Q9HA47 277 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 KCNK13Q9HB14 408 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 FANCEQ9HB96 536 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 NMRAL1Q9HBL8 299 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 S100A14Q9HCY8 104 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 SLC6A20Q9NP91 592 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 SLCO1B3Q9NPD5 702 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 C8orf4Q9NR00 106 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 C1GALT1Q9NS00 363 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 RAD18Q9NS91 495 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 SEMA3GQ9NS98 782 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 CUTCQ9NTM9 273 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 C20orf96Q9NUD7 363 aaPredicted RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 ARL8BQ9NVJ2 186 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 OXSMQ9NWU1 459 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 GID8Q9NWU2 228 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 ZDHHC3Q9NYG2 299 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 UTP6Q9NYH9 597 aaKnown RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 EURLQ9NYK6 297 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 STMN3Q9NZ72 180 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 C6orf203Q9P0P8 240 aaPredicted RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 MARCH4Q9P2E8 410 aaPredicted RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 SLC17A7Q9P2U7 560 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 GALPQ9UBC7 116 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 COPG2Q9UBF2 871 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 CTSFQ9UBX1 484 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 NKX1-2Q9UD57 310 aaPredicted RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 EPHA6Q9UF33 1036 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 FBXL4Q9UKA2 621 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 POMT2Q9UKY4 750 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 CNOT11Q9UKZ1 510 aaKnown RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 ACSL5Q9ULC5 683 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 SLC39A10Q9ULF5 831 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 SOX13Q9UN79 622 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 G3BP2Q9UN86 482 aaKnown RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 NPIPA1Q9UND3 350 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 PLCL2Q9UPR0 1127 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 ICKQ9UPZ9 632 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 VWA7Q9Y334 891 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 MRPS2Q9Y399 296 aaKnown RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 AP4S1Q9Y587 144 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 PCDHGB6Q9Y5F9 930 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 PCDHGA6Q9Y5G7 932 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 DNMT3AQ9Y6K1 912 aaPredicted RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 COMMD3-BMI1R4GMX3 469 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 NYNRINQ9P2P1 1898 aaKnown RBP1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 BOD1L1Q8NFC6 3051 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 SVILO95425 2214 aa1.47□□□□□ -2.17
RNU1-42P-201ENST00000364033 SPENQ96T58 3664 aaKnown RBP1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 MYO7BQ6PIF6 2116 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 CCDC168Q8NDH2 2452 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 PIKFYVEQ9Y2I7 2098 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 PCSK5Q92824 1860 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 CCDC88CQ9P219 2028 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 A0A087X1B8 175 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 A0A088AWK7 358 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 A0A096LPK6 155 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 A0A0A6YYC8 382 aaPredicted RBP1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 NSG1A0A0A6YYJ2 146 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 A0A0J9YY10 115 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 RNF103-CHMP3A0A140T963 221 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 C17orf113A0A1B0GUU1 675 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 TCRBV7S3A2A0A539 114 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 SLC5A10A0PJK1 596 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 FEZF1A0PJY2 475 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 CCDC189A1A4V9 331 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 DYTNA2CJ06 578 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 NKX2-6A6NCS4 301 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 CCDC160A6NGH7 325 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 CAPN14A8MX76 684 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 CFAP99D6REC4 459 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 G3V3Y1 287 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 H0YGG7 62 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 H3BMH7 237 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 H7BY64 318 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 I3L1I5 382 aaPredicted RBP1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 SGK494L7N484 410 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 PSMD12O00232 456 aaPredicted RBP1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 MATN2O00339 956 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 TXNDC9O14530 226 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 CASQ2O14958 399 aaPredicted RBP1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 UBDO15205 165 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 HDAC3O15379 428 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 ZSCAN9O15535 394 aaPredicted RBP1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 HNRNPRO43390 633 aaKnown RBP1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 PRICKLE3O43900 615 aaPredicted RBP1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 CDC40O60508 579 aaKnown RBP eCLIP1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 CCNT2O60583 730 aaKnown RBP1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 PLIN3O60664 434 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 B4GALT2O60909 372 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 PFDN1O60925 122 aa1.46□□□□□ -2.18
RNU1-42P-201ENST00000364033 KCNJ13O60928 360 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms