RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 TMBIM6P55061 237 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 PCDH1Q08174 1060 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 DOC2AQ14183 400 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 CYP2A13Q16696 494 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 PAGE2BQ5JRK9 111 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 PRAMEF14Q5SWL7 426 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 BROXQ5VW32 411 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 PRAMEF13Q5VWM6 474 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 SUSD1Q6UWL2 747 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 SFTPA2Q8IWL1 248 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 RBM12BQ8IXT5 1001 aaKnown RBP12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 PHACTR4Q8IZ21 702 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 DTWD1Q8N5C7 304 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 GLB1L3Q8NCI6 653 aaPredicted RBP12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 SMPDL3AQ92484 453 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 USP7Q93009 1102 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 NEIL2Q969S2 332 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 TMBIM1Q969X1 311 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 MAGED4Q96JG8 741 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 COG8Q96MW5 612 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 MIR1-1HGQ9H1L0 117 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 TBC1D23Q9NUY8 699 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 PCOLCE2Q9UKZ9 415 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 SNRNP200O75643 2136 aaKnown RBP12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 CPNE6O95741 557 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 MT-ND1P03886 318 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 ERGP11308 486 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 SLC2A4P14672 509 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 FNTBP49356 437 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 ENTPD1P49961 510 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 RAB28P51157 221 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 MTPNP58546 118 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 ZNF33BQ06732 778 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 SRSF5Q13243 272 aaKnown RBP12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 C16orf72Q14CZ0 275 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 FRG2Q64ET8 278 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 GRHL2Q6ISB3 625 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 TMEM214Q6NUQ4 689 aaKnown RBP12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 TBPL2Q6SJ96 375 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 LCTLQ6UWM7 567 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 ARMCX6Q7L4S7 300 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 TRIM46Q7Z4K8 759 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 THAP5Q7Z6K1 395 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 TMPRSS11BQ86T26 416 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 STK32CQ86UX6 486 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 PARGQ86W56 976 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 MAML2Q8IZL2 1156 aaPredicted RBP12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 ZNF555Q8NEP9 628 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 OR2T12Q8NG77 320 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 BORCS5Q969J3 196 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 ABTB1Q969K4 478 aaPredicted RBP12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 REPS1Q96D71 796 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 CXorf40BQ96DE9 158 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 MTFMTQ96DP5 389 aaKnown RBP12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 MUS81Q96NY9 551 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 FRG2BQ96QU4 278 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 NTN4Q9HB63 628 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 FARSBQ9NSD9 589 aaKnown RBP12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 DNAJB9Q9UBS3 223 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 USP22Q9UPT9 525 aa12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 HEMK1Q9Y5R4 338 aaPredicted RBP12.62□□□□□ -0.39
SQSTM1-201ENST00000360718 MYO15AQ9UKN7 3530 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 KCNE1BA0A087WTH5 132 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 A6NCN8 305 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 G3V2T6 193 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 ATE1O95260 518 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 F3P13726 295 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 CD22P20273 847 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 RACK1P63244 317 aaKnown RBP12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 LAPTM5Q13571 262 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 NEDD8Q15843 81 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 HIST2H2ACQ16777 129 aaPredicted RBP12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 ZNF829Q3KNS6 432 aaPredicted RBP12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 CACHD1Q5VU97 1274 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 HIST2H2AA3Q6FI13 130 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 IQCHQ86VS3 1027 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 C8orf59Q8N0T1 100 aaPredicted RBP12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 SVOPLQ8N434 492 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 DNAJB8Q8NHS0 232 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 SLC13A3Q8WWT9 602 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 SLC5A11Q8WWX8 675 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 EFCAB11Q9BUY7 163 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 THUMPD3Q9BV44 507 aaKnown RBP12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 EHD1Q9H4M9 534 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 PRMT8Q9NR22 394 aaPredicted RBP12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 POLR3HQ9Y535 204 aaPredicted RBP12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 DMDP11532 3685 aa12.61□□□□□ -0.39
SQSTM1-201ENST00000360718 FRYLO94915 3013 aa12.6□□□□□ -0.39
SQSTM1-201ENST00000360718 TRIM64BA6NI03 449 aa12.6□□□□□ -0.39
SQSTM1-201ENST00000360718 ANKRD28O15084 1053 aa12.6□□□□□ -0.39
SQSTM1-201ENST00000360718 SCELO95171 688 aa12.6□□□□□ -0.39
SQSTM1-201ENST00000360718 PDYNP01213 254 aa12.6□□□□□ -0.39
SQSTM1-201ENST00000360718 ALPLP05186 524 aa12.6□□□□□ -0.39
SQSTM1-201ENST00000360718 IL6P05231 212 aa12.6□□□□□ -0.39
SQSTM1-201ENST00000360718 DGKQP52824 942 aa12.6□□□□□ -0.39
SQSTM1-201ENST00000360718 TPD52P55327 224 aaPredicted RBP12.6□□□□□ -0.39
SQSTM1-201ENST00000360718 TOP3AQ13472 1001 aaPredicted RBP12.6□□□□□ -0.39
SQSTM1-201ENST00000360718 MAPKAPK3Q16644 382 aa12.6□□□□□ -0.39
SQSTM1-201ENST00000360718 ZIK1Q3SY52 487 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms