RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ANKRD33Q7Z3H0 272 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 ITIH5Q86UX2 942 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CALHM3Q86XJ0 350 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 COX4I2Q96KJ9 171 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 ZNF558Q96NG5 402 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 MUS81Q96NY9 551 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 MCCC1Q96RQ3 725 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 ACPTQ9BZG2 426 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 SLC32A1Q9H598 525 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 KAT8Q9H7Z6 458 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 ZFP14Q9HCL3 533 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 SEPSECSQ9HD40 501 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 SERHLQ9NQF3 203 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 MRPL17Q9NRX2 175 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 SLC6A13Q9NSD5 602 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CDH7Q9ULB5 785 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 PDE10AQ9Y233 779 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 MAGED1Q9Y5V3 778 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CROCCQ5TZA2 2017 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 DNAH14Q0VDD8 3507 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 NPIPB8E9PQR5 432 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 PDYNP01213 254 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 ANXA5P08758 320 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 BCKDHAP12694 445 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 NFKBIAP25963 317 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 DCKP27707 260 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 PTPN6P29350 595 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 NRIP1P48552 1158 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CLDN8P56748 225 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 SEMG2Q02383 582 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 ARHGEF7Q14155 803 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 PLCL1Q15111 1095 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 OTUD3Q5T2D3 398 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 ATG9BQ674R7 924 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 LIPIQ6XZB0 460 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 TMCO2Q7Z6W1 182 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CD163Q86VB7 1156 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CLVS1Q8IUQ0 354 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 NPAS3Q8IXF0 933 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 KRT78Q8N1N4 520 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 OR10H5Q8NGA6 315 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 ZNF420Q8TAQ5 688 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 PNPT1Q8TCS8 783 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 FIG4Q92562 907 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 C12orf43Q96C57 262 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 AURKBQ96GD4 344 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CNDP2Q96KP4 475 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CAPNS2Q96L46 248 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 RDH12Q96NR8 316 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 SH3GL1Q99961 368 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 THUMPD3Q9BV44 507 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 PAIP1Q9H074 479 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 EPS8L2Q9H6S3 715 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CNTD2Q9H8S5 307 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 DNAJB9Q9UBS3 223 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 ADGRE2Q9UHX3 823 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 LSM7Q9UK45 103 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 HS3ST2Q9Y278 367 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 AP3M1Q9Y2T2 418 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 HEMK1Q9Y5R4 338 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 PRRC2BQ5JSZ5 2229 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 ELOVL7A1L3X0 281 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 SCELO95171 688 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CPNE6O95741 557 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CSTBP04080 98 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 RETP07949 1114 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 PCNAP12004 261 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 IL1RNP18510 177 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 LHCGRP22888 699 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 TTKP33981 857 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 SLC6A12P48065 614 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CYP4F8P98187 520 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 RAB39AQ14964 217 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 RTP5Q14D33 572 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 ATP13A5Q4VNC0 1218 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 GPR149Q86SP6 731 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 TMC8Q8IU68 726 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 OR52E6Q96RD3 313 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 TUBA1CQ9BQE3 449 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 OSBPL10Q9BXB5 764 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CXorf21Q9HAI6 301 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 DCAF13Q9NV06 445 aaKnown RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 PKD2L2Q9NZM6 624 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CFAP97Q9P2B7 532 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 MBD1Q9UIS9 605 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-202ENST00000360642 CDC14AQ9UNH5 594 aa7.05□□□□□ -1.28
CLCN3-202ENST00000360642 DENND4CQ5VZ89 1909 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 PIKFYVEQ9Y2I7 2098 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 FAM220BPB1ANY3 271 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 G3V2T6 193 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 CXCR6O00574 342 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 TEX28O15482 410 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 NUAK1O60285 661 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 ERN1O75460 977 aaKnown RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 GMNNO75496 209 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 KRT6AP02538 564 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 KRT6BP04259 564 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 AMY1AP04745 511 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 URODP06132 367 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 GLI4P10075 376 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms