RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 ARHGAP19Q14CB8 494 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PCBP2Q15366 365 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 UBAP2Q5T6F2 1119 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TICAM1Q8IUC6 712 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 MEIOBQ8N635 442 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 NKX2-4Q9H2Z4 354 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TIGARQ9NQ88 270 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 SPATA6Q9NWH7 488 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 KLRF1Q9NZS2 232 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 MBD2Q9UBB5 411 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 GJD2Q9UKL4 321 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 CFAP20Q9Y6A4 193 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 LOC100130705A0A1B0GUX0 176 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 ANXA2P2A6NMY6 339 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PRODHO43272 600 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 EMC8O43402 210 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 EEDO75530 441 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PPM1BO75688 479 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 ALDOAP04075 364 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 ANXA2P07355 339 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 SRCP12931 536 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 RNH1P13489 461 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 HNRNPA2B1P22626 353 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 HTR1EP28566 365 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 GDF5P43026 501 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 SRP54P61011 504 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TUBA1BP68363 451 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TUBA4AP68366 448 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 LIN52Q52LA3 116 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 CXorf57Q6NSI4 855 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 NXPE4Q6UWF7 544 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TUBA1AQ71U36 451 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TMIEQ8NEW7 156 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 NFKBIDQ8NI38 313 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 GNPDA2Q8TDQ7 276 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 LRRC46Q96FV0 321 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 MND1Q9BWT6 205 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 UCK2Q9BZX2 261 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 MAGIXQ9H6Y5 334 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 CXorf21Q9HAI6 301 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PCDHB16Q9NRJ7 776 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 BLACEA4D250 179 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 IGLON5A6NGN9 336 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 C9JVG2 144 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 NPIPA5E9PKD4 350 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 RFPL2O75678 378 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PRKD3O94806 890 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 SEMA4FO95754 770 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 BPIP17213 487 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TNFRSF4P43489 277 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 ARSFP54793 590 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TRAM1Q15629 374 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 COLEC12Q5KU26 742 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 SPANXN4Q5MJ08 99 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 GRHL2Q6ISB3 625 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 APCDD1Q8J025 514 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 LRRC25Q8N386 305 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 ZNF483Q8TF39 744 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 KCNN1Q92952 543 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 NXPE3Q969Y0 559 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TMCO6Q96DC7 493 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 HS6ST2Q96MM7 605 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 SGIP1Q9BQI5 828 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 SLC12A9Q9BXP2 914 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 OR51V1Q9H2C8 321 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 EVA1AQ9H8M9 152 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 RDH14Q9HBH5 336 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PREBQ9HCU5 417 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 NPIPA1Q9UND3 350 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 GPR34Q9UPC5 381 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 HCN4Q9Y3Q4 1203 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 LRRC42Q9Y546 428 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 DDX60LQ5H9U9 1706 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 H7BY64 318 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 M0QX08 132 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TSC22D2O75157 780 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 DNAJB5O75953 348 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 SNAPC5O75971 98 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 JUNDP17535 347 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 SLC6A6P31641 620 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TBPL1P62380 186 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 POU6F2P78424 691 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 MRPS21P82921 87 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PLGLB1Q02325 96 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TMEM198Q66K66 360 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 ZC3H14Q6PJT7 736 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 SMARCD3Q6STE5 483 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 NAPRTQ6XQN6 538 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 KCTD8Q6ZWB6 473 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 IQCHQ86VS3 1027 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TMEM25Q86YD3 366 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PRAP1Q96NZ9 151 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PCDHAC1Q9H158 963 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PELI2Q9HAT8 420 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 TVP23BQ9NYZ1 205 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 APOBEC3BQ9UH17 382 aaKnown RBP4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PSAT1Q9Y617 370 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 PIAS3Q9Y6X2 628 aa4.69□□□□□ -1.66
SCN3A-202ENST00000360093 ADAMTS7Q9UKP4 1686 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms