RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 HOXC4P09017 264 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 TBC1D3HP0C7X1 549 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 TPP2P29144 1249 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 PEX19P40855 299 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 RAD23AP54725 363 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 HBA1P69905 142 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 MC1RQ01726 317 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 KRT33BQ14525 404 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 ZIK1Q3SY52 487 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 IER5LQ5T953 404 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 TBC1D3GQ6DHY5 549 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 TBC1D3CQ6IPX1 549 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 DUS1LQ6P1R4 473 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 TMEM26Q6ZUK4 368 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 USP30Q70CQ3 517 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 PIWIL3Q7Z3Z3 882 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.5■□□□□ 0.391e-6■□□□□ 9
PDLIM7-203ENST00000359895 TBC1D3Q8IZP1 549 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 OFCC1Q8IZS5 231 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 TTLQ8NG68 377 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 OR2L8Q8NGY9 312 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 SCARF2Q96GP6 870 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 NECTIN4Q96NY8 510 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 DPH2Q9BQC3 489 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 SLC35A5Q9BS91 424 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 GABARAPL1Q9H0R8 117 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 TOR3AQ9H497 397 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 SMURF2Q9HAU4 748 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 TAS2R9Q9NYW1 312 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 ADAM29Q9UKF5 820 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 ICKQ9UPZ9 632 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 MAGED1Q9Y5V3 778 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 TRANK1O15050 2925 aa17.5■□□□□ 0.39
PDLIM7-203ENST00000359895 A0A1W2PRB8 838 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 PLPP1O14494 284 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 CAPN5O15484 640 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 KRT75O95678 551 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 CLIC3O95833 236 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 NTRK1P04629 796 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 PKLRP30613 574 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 IST1P53990 364 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 ELOAQ14241 798 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 MLF2Q15773 248 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 ZC3H12BQ5HYM0 836 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 TRIM40Q6P9F5 258 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 C8orf59Q8N0T1 100 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 GALNT15Q8N3T1 639 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 ARL10Q8N8L6 244 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 ANKRD53Q8N9V6 530 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 NRBF2Q96F24 287 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 HSH2DQ96JZ2 352 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 VCX3AQ9NNX9 186 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 PAPOLBQ9NRJ5 636 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 IMP3Q9NV31 184 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 FAM118AQ9NWS6 357 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 MOSPD1Q9UJG1 213 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 KCNK6Q9Y257 313 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 GPSM3Q9Y4H4 160 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 HEBP2Q9Y5Z4 205 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 A0A1W2PQF6 199 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 H7BY64 318 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 VILLO15195 856 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 NOBOXO60393 691 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 DPM1O60762 260 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 ADAM23O75077 832 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 FKBP9O95302 570 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 EGFP01133 1207 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 DRD1P21728 446 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 PSMB5P28074 263 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 BSGP35613 385 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 CRATP43155 626 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 MAPK12P53778 367 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 KIAA1024LP59773 190 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 ESRRGP62508 458 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 MRPS21P82921 87 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 PRDX1Q06830 199 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 DLX2Q07687 328 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 UAP1L1Q3KQV9 507 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 GCNT6Q5T4J0 391 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 THAP5Q7Z6K1 395 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 NUDT13Q86X67 352 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 SLC30A8Q8IWU4 369 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 ALDH16A1Q8IZ83 802 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 NAGSQ8N159 534 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 LINC01555Q8NAE3 123 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 ZFAND2BQ8WV99 257 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 CIDECQ96AQ7 238 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 RGMAQ96B86 450 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 MUS81Q96NY9 551 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 PRAP1Q96NZ9 151 aa17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 SOX17Q9H6I2 414 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-203ENST00000359895 CCDC160A6NGH7 325 aa17.48■□□□□ 0.39
PDLIM7-203ENST00000359895 NDUFS4O43181 175 aa17.48■□□□□ 0.39
PDLIM7-203ENST00000359895 SUV39H1O43463 412 aa17.48■□□□□ 0.39
PDLIM7-203ENST00000359895 HS6ST1O60243 411 aa17.48■□□□□ 0.39
PDLIM7-203ENST00000359895 TNFRSF21O75509 655 aa17.48■□□□□ 0.39
PDLIM7-203ENST00000359895 CLEC3AO75596 197 aa17.48■□□□□ 0.39
PDLIM7-203ENST00000359895 TBX6O95947 436 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms